Leptidea sinapis (Wood White): 126973793
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Entry
126973793 CDS
T09272
Name
(RefSeq) low-density lipoprotein receptor-related protein 4
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126973793
Membrane trafficking [BR:
lsin04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
126973793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
cEGF
Vgb_lyase
EGF_LRP2
EGF_CA
EGF
NeA_P2
Motif
Other DBs
NCBI-GeneID:
126973793
NCBI-ProteinID:
XP_050677069
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Position
30:9925463..9968999
Genome browser
AA seq
1907 aa
AA seq
DB search
MNLSMNLKLIQYFLVVFISHCAYGDDAFILPNQRFANGSAEPDTRSVGRVPPYQPPAIGI
SGPIQVPGFRPHSPYTRVDAWHPNGRIYINPRESYVVADDIDDGHDDGGCHLPCSKEFFS
CQTSCKCIELEKRCDGVVDCIDAEDEAGCRKACDEQDNRTLCHGTNVCIAFDWLCDGDND
CGDFSDETHCGLEVNCTEEQFQCNNGLCIQKEWLCDGDNDCRDGSDEINCPKGKCKDKQF
VCSSGDCIPPHWRCDKEADCPDNSDETECPVDFLQCGENEIQCENGKCIRKDFQCDGDND
CGDWTDEDSCPLLPGNCNAAEYKCNDGRCIPERWRCNMEKDCTDGDDELDCEALGIRNCT
LDEHMCEDRRCISKTWLCDGVRDCANGEDETNCEVNCEEDQYMCKSLVKNAFRNCVNKKH
VCDGMKDCPQGDDEDNCPTKRKCTGRDRCERQCITTYEGKPACACPLGYKLAEDGYSCRD
IDECMYEQDPVCSQTCSNTQGSYHCGCMTGYVLRPDERSCKATGESPTLLFSNRIGVRKV
WLTGDNYVTVLKGLHNAVALDYHYEKKLIFWTENNMKVIRVAPLDSNNMTDVIRWGLETP
SGVAVDWIHDLLFWTDSGTRRVEVATLDGVHRAVLAASDLDKPRAIAVHPGDALIFWTDW
GPNPKIERSDMDGSRRKSVIVDNIFWPNGLTIDYMESKIYWADAKHHVIEKASFDGRDRK
RITNKGVPHPFALTVFEDAIYWTDWHTKSISTINKNTGMGIQTIHSSLQVPMDIQSFHPL
RQLRTYKNRCGGNNGGCSHICLPNSNGYSCRCPLGYNLKSDGRTCVDTPEKLLLYARRKD
IRLKLLNPRKQMDALDMVIPVDSIKSAVALDWDHARKRIFWTDVEKDTINRAFLNGSNQT
VIVSTNLISPAGLAYDWMTDKIYWTDAGTNRIEVANSDGTMRTLLAWENIDKPRDIVVDP
KGGVMYWSDWGKSPCIERADMDGRNRQRLIMGDMTWPNGLALDLLNHKIYWTDGGNRTIE
FANLDGTGRTVLIGQHLPHPFGLDLYGDEVFWTDWDTNSIQAANKYTGKNRRTLGAGVEG
LMDVRVFHKERRGGTNRCGKNNGGCSHLCLLKPGGRTCTCPTGIKMMDDGKTCTDGPINY
LLFAHRVDVRFVSFDVPYLVDVVYPFQGLKNALGADVDQNTGLIYWTDTAERIIRRADKF
GQNAQTIINRGLQTADGLAIDSAGRKVYWTDGGRNSVEVSELDGTSRKVLVWTGLDSPRG
IALHYEKGYMFWSDWGNVAKIERADLDGSNRYIIATAGVKWPNGLAIDRIQDRLYWNDAK
ENTIESADFNGLGRKTILSEVPYPYGIVVVGQHIYWTDWKTKALHRADKHNVSDQLIVRD
NLEGLMDIRVIQGDYNLDNVCGLNNGGCSHLCLRNSKGYSCACPTGLRFENETDPESKIC
KKHPDNFLIFATQTSMTVISLDTPELREINIPVKEMKSSIALDFHWDNKLIFYTDVKLNQ
IRTLDMENMTQSRTIVNSSLETPNGLAVDWIANNLYWTDNEYKVVEVAKLDGSCRKVLLT
GLSEPRSVALFPAKGYLYWSDWGEHPSIERAALDGTQRKMIVDHDLGFPNGLTIDYVERR
LYWTDALKDRIDTSDLNGQHRVQLVPDAKNPFGMTQFRDHIYWTDWYKKAVIRADKSTGK
NVTSVSANFEMAMEIKTVSHERQHGWNPCLENNGGCSHLCFFRGHDYVCACPDSPDDKVC
LTNPNERVELRMPSHYPPNYDYMDYEHTDLPTPTPATESRTFVITIGLTAVVFVMICLVL
TVIGCVKILKERHSDMKETHRDSSCHISFPNPNYEQSNSGNSSGEPMDRRYRLQGVFKYD
KSQNRVTNVYMPEGTSLLPPPPPPPHRQPLRPPTHDDFEPVTLHSFT
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcagcatgaatctgaaattgatacaatacttccttgtcgtttttatttcacac
tgtgcttatggagatgatgcgttcatattgccgaaccagcgctttgccaacggctcagca
gaacctgacactaggtccgtcggccgagtgcctccgtaccagccacctgcaatcggcata
tccgggcctattcaagtaccagggttcagaccacatagcccatacactagagttgatgca
tggcatccaaacgggcgcatttacataaatccaagagaatcctacgtagtggctgatgac
atagacgacggccatgacgacggaggttgccatcttccgtgctccaaagaattcttctcg
tgccagacgtcctgcaagtgcatagagttggagaaacgttgcgatggagtagtggactgt
atcgacgctgaagacgaagccggctgcaggaaggcttgcgatgaacaggacaaccggacg
ctgtgtcatggcaccaacgtatgcatagcgttcgactggctttgcgatggcgacaacgat
tgtggagacttctccgacgagacacattgcggactagaagtaaattgcactgaggagcaa
tttcagtgtaacaacggcctgtgcatacagaaggagtggctgtgtgatggtgacaacgat
tgtcgagacggttctgacgagatcaactgccctaaaggaaaatgcaaagataaacaattt
gtgtgctcgtcgggggattgcatacctccacactggcgatgcgacaaggaggcagattgt
ccagataattctgacgagactgaatgtcctgtcgatttcctacaatgcggggagaatgaa
atccaatgcgaaaacggcaagtgtattcgtaaagatttccaatgtgatggagacaatgac
tgtggggactggactgatgaagactcctgtcctctactgcctggaaactgcaatgctgct
gaatataagtgtaatgatggacgctgtatccctgagcggtggaggtgcaacatggagaag
gattgcaccgatggtgatgacgagttggactgcgaagccctgggaattagaaactgcacc
ctcgatgaacatatgtgtgaagaccgcagatgcatttcgaaaacttggctatgtgatgga
gttcgtgactgcgcgaatggtgaagacgaaacaaattgtgaagttaattgcgaggaggac
caatacatgtgcaagtctctagttaaaaatgcatttcgtaattgtgtgaacaagaaacac
gtttgcgatggaatgaaagattgcccgcaaggtgatgatgaagataattgcccaactaaa
aggaaatgtactggaagggatagatgcgagagacaatgcataacaacatacgaagggaaa
ccagcatgtgcttgtcctttaggttataagttagcggaagatggatacagctgccgcgac
atagatgaatgtatgtacgaacaagatccagtttgctcccaaacatgttctaatacccaa
ggcagttaccattgtggatgtatgacggggtacgttctcaggcctgatgaaagatcctgt
aaagctactggagaatcaccaactctgctgttttccaatcgtattggcgtccgtaaggta
tggttgaccggtgacaactatgtaactgtgctaaaaggattacataacgcagtagcactg
gattaccactatgaaaagaaattaatattttggaccgaaaataatatgaaagtcattcga
gtcgctccattggatagcaataacatgacagatgttataagatggggtctggaaactcca
agcggggtggcagtagattggattcatgatttattattttggaccgactctggtacgagg
cgagtggaagtagcgacactggatggcgtacacagagcagtcttggcagctagcgatttg
gacaaaccaagagctattgcagtgcatcctggagacgcacttatattttggacggattgg
ggaccgaatccgaaaatagaacgctccgatatggatggcagtagaaggaaaagtgtcata
gtggataacatattctggccaaatggattaacaattgactatatggagtccaaaatatat
tgggcagatgctaaacatcatgttatcgaaaaggcttcatttgatggaagggatcgtaaa
cgaataactaataaaggtgtcccacatccgtttgcattaactgtttttgaagatgctata
tattggacagattggcacacgaaaagcatatcaactattaataaaaatactggaatggga
atacaaacaatacattctagtttacaagtacctatggatatacagagttttcatccacta
cgtcaactaaggacgtacaagaatcgatgtggtggtaataacggcggttgctcccatatt
tgtcttcctaatagcaacggatattcttgccgatgtcctctgggctataatctcaaatct
gacgggcgaacttgtgtcgacactcctgaaaagttactgctgtacgcaagacgaaaagat
atcagattaaaattactgaacccaaggaaacaaatggatgccttggacatggtgatacca
gtggatagtattaagtcagccgtagcactagattgggatcacgcaaggaaaagaatattc
tggacggatgtagaaaaggacacaatcaacagagcgttcttaaatggatcaaatcagaca
gtaatcgtcagcacaaacctgatatcgccggctggattggcctatgattggatgacagat
aaaatttactggacagatgcaggaactaacaggatcgaagtagctaactctgacgggact
atgaggacgctactagcatgggaaaacatcgataagccacgtgatattgtagtagatcct
aaaggtggtgtaatgtattggtcggattggggtaaatcaccatgtatagaacgcgctgat
atggatggtcggaaccgacagcgtcttataatgggcgacatgacgtggccaaacggttta
gctttggatttgctgaatcataaaatttattggactgatggtggaaatagaacgattgag
ttcgcaaacctcgatggcacaggccgcacagtgctgataggtcaacatctacctcatcca
tttgggttagacctctacggcgatgaagtgttttggacggactgggacacgaattctatt
caagcagcaaataaatacacaggcaaaaataggcgcactttgggtgcaggtgtcgaaggt
ctcatggatgtcagagtgtttcataaggaaagaagaggtggaactaaccgctgcggtaag
aataatggtggttgctcacatctatgtctactgaaacccggcggaagaacttgtacctgt
ccaactggaattaagatgatggatgatggcaaaacgtgcacagatggaccaataaattat
ctgctgtttgctcatcgagtggatgtacgcttcgtctcatttgatgttccctaccttgtg
gatgttgtgtatcccttccagggactaaagaatgcacttggtgcagacgtggatcaaaat
acaggtttgatttattggacggatactgccgagaggataattcgtcgagcagataagttt
ggtcaaaatgcgcaaactattatcaacaggggcttgcaaaccgctgatggattggccatc
gactcagcaggccgtaaggtatactggacagacggagggcgaaacagtgttgaagtatca
gaactagatggaaccagtcgcaaagttcttgtttggactggattagattctccccgtgga
atagcgttgcattatgaaaagggttacatgttttggtcggactggggtaatgtggcgaaa
atagaaagagctgatttggacggtagcaatagatatattattgccacagctggagtaaag
tggccgaatggtctagcaattgatcgcatacaagatcgcttatattggaatgatgctaag
gaaaatacaattgagagcgccgatttcaatggcttgggtcggaaaactattctcagtgaa
gtaccatacccttatggcatagtagttgtaggacagcatatctattggactgactggaaa
actaaagctttgcatagagctgataagcataatgttagtgatcagcttattgttagagat
aatcttgaaggtttgatggatataagagtaattcagggcgattataacctggataatgta
tgcggtctaaacaacggtggttgctcacatctttgccttcgaaattcaaagggatattca
tgcgcatgtccaacgggtctccgttttgaaaacgagaccgatccagagtcaaagatatgc
aagaaacatccagacaactttttaatatttgcaacacaaactagcatgaccgttatatct
ctagacactcctgagttgagagaaatcaatattccggtcaaagaaatgaaaagttctatt
gcactggacttccattgggataacaaattaattttctatactgacgttaagctaaatcaa
ataagaaccttagacatggaaaacatgactcagagcagaactattgtcaattcaagtttg
gaaacaccaaatggtttagcagttgattggattgcaaataatttgtattggactgacaat
gaatataaggttgttgaagttgcaaagttagacggctcctgcagaaaagttttactaacc
ggtctaagcgaacctagatctgtagcgctatttccagctaaaggttatctatattggagt
gattggggagaacatcccagtattgaaagagctgcgctagatggaactcaacggaaaatg
atcgttgatcacgaccttgggtttcccaatggtcttacgattgattatgtcgaacgaagg
ctgtactggactgatgcgttgaaggacaggattgatacatcagacttaaatggccagcac
agagttcaactggtgccagatgcgaaaaatccatttggaatgactcagtttcgtgatcat
atttattggaccgattggtataagaaggccgtgattcgcgccgacaaaagcactggaaaa
aacgttacgtcagttagtgctaactttgaaatggctatggaaataaagacggtgtctcat
gagagacagcatggctggaatccatgtcttgagaacaacggcggatgttcacatctatgt
ttctttagaggacatgattatgtttgcgcttgtccagactcacctgacgataaagtttgc
ttgacgaatccaaatgagcgcgtggaactaaggatgccttcacactatcctccgaactat
gactatatggactacgagcacacagacttgccaactccaacaccggcgaccgaatctaga
acattcgtcatcaccatcggattaactgctgtggtctttgttatgatatgccttgtttta
actgtaataggttgtgtgaaaattctcaaagaacgtcatagtgatatgaaagaaacacat
cgcgattcaagttgccatatttcgttccccaatcccaactatgaacaatctaatagcggc
aacagctcaggggaaccgatggatcgacgctaccgcttacagggagtcttcaaatacgac
aaaagtcagaatcgtgtgaccaacgtttacatgccggagggaaccagtcttctgccgccg
ccacctccgcctcctcacagacagccgctccgacctccaactcacgacgactttgaacct
gtcaccctgcactctttcacctaa
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