Leptidea sinapis (Wood White): 126974043
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Entry
126974043 CDS
T09272
Name
(RefSeq) tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsin03037
]
126974043
Cilium and associated proteins [BR:
lsin03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
126974043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
TPR_2
TPR_8
CHAT
TPR_10
TPR_MalT
TPR_17
TPR_11
TPR_16
TPR_19
TPR_4
RPN7
Paf67
Motif
Other DBs
NCBI-GeneID:
126974043
NCBI-ProteinID:
XP_050677372
LinkDB
All DBs
Position
31:2886414..3003079
Genome browser
AA seq
2334 aa
AA seq
DB search
MSQRDFSEVEPSGSSSLGAASRAVFVEKVRASNAACQAGDFTTAVALYTDALTLDPANHI
LYSNRSAARLKQGQFAAALQDATRARELCPNWPKAYYRQGVALQCLGRHGEALAAFSSGL
GVEPSSRQLLASLVEASLKSPLRNTLEPTFRQLEAMKLDQSPFVLISVVGQELLAAGHYQ
AAVTVLEAALRIGSCSLKLRGSVFSALSSAHWALSQLDAAINYMQQDLAVAKSLGDTAGE
CRAHGNLGAAYFSQGSYKDALTAHRYQLVLAMKCKDTYAAAAALTSLGHVYTAIGDYSNA
LASHKQCVQLVKQMGDKLQEAREIGNVGAVYLAMGEFDSAVDCHTQHIRLARRLGDQVEE
ARAYSNLGSSYHYRRNFTQAIAYHENVLRIAQNLGDRAIEARAYAGLGHAARCAGDYAQA
KKWHERQLDVALAARDKVGEGRACSNLGIVYQLLGEHDAALKLHQAHLSIARQLQDKAGM
GRAYGNIGNAYSAAGFYEQAIKYHKQELTISKEVHDRSSEASTHGNLAVAYQALGAHDMA
LFHYRAHLGIARELKDTAGEACALLNLGNCLSSRGEFAQAVPYYEQHLMLSQELGDVTAE
SKACHFLGYAHYCLGNFREAVRYYDQDLSLAKDLQDKMNMGRAYCNLGLAHLALGNLETA
LECQKYFLAIAHMTQHLQGKFRALGNIGDVLIKMGDVEEAVKMYQRQLGFARQARDRSLE
AAACGALGRARRLQRRLDAALGHHTQELTLRQEAGDLAGEARAHSQLGAVHVVLGNYSHA
ATCYREQLERAQELQDCALEAQAYGNLGIVKLNMGHYEDAIGYFEQQLAILERVNTPTCH
IDRAEALGFLGNCYDALGDPDEALKYHEQHLAAALKLNSAREQERAYTGLAMTYKSMGNL
QQALVCLEKRLVVAHELGDPVAKAHAYGELGALHISLNNLEQAVSCLEHKKNIAKELANR
IMEAEACHALGAAHQALGEHATALKHHRAELELANALGLTHLQGRACGGLGAAHAATGAH
AEAARWHESRLRHATASGDSRGRANALADLGRAHLAMGACGSAVSYLRQSLAATEGLADA
DEESRVRHRLGFALWASGELEEAKDQLQAALNVLESSNEKHRDRKMAALYTSTQHALQRV
LVELGREGEALLVAERGRCRGLDTLDKHVSSQNSDVHNMQRNVTEDGNKERVEQWLPSSV
DHILEVVNKLKAPVLYYSLAAGRLYSWLIQPHKGILRFHQVSLIDQVEDGDNSLPDISAD
DLKTNTNVVKLERCINEWSTWLKTAERRDEEWEPDDRPSTGLARIVNRNHLLNSSNYSLS
SLFSVGSVGGSVAGSVASLQGSTRSSIHGPRKNKPSWQGPPCLLDLYQMLLAPFEDLLPA
SCNNNHASHSHRGCGGRRELILVVEGALFACPWGALRAGADAEPLCERYALLAAPAIKPL
RPHKHNRQNRLRSEHGTSNNESGMRSLVIGGARVGGSRWSSHPALLKEAELVADMLRVTP
LTDYQASKEAVIAQLPQAECIHFATHVCWKTSAIVLSPGEVVDSQAKRLNSSVGGNAADT
STETEEENADIISHSNEDLPPISEFMLTASEIMNLKLTARLVVISCAPSTSVIEESDSSD
AVTKAGEGVSRLCRALLAAGAQAILVTLWPAPQDTATKILYRALYSALLQGSRVAKALGD
AMQTVRHTKHFAHPAHWAGCVLLGSNVRLSNKVALMGQALCELLASPAPHCRDALRVCLH
LVEKSLQRIVRGQKNAMYTTQKSIENKAGNVSGWRELLMSVGFRFEPAANGIPSSVFFPQ
SDPEERLTQCSASLQALLGLTPTTLQALSKLIANGDVADDIISVIRSIISQFSVKSSDTD
TIEVSVNVRLWRVSGCHELLASLGLDLAEVGQDDVTLRGKATNRRHVHFVLQALLALFDT
QEAPRSLSLESSSSVESLASIDDGDLEPHSDGEISQKQQRQDSASSVPPPPLPLGSCGGA
FTMYVRGSGASSEVGRGEPDGRTAPPPAPPPPRYRGESDAAFTPSPPAAQQNVSLALAHQ
TKIRTLYTRRPPSDDSDWESSGHDTVLRRRPDLQQRYFDACYYLVSEQRRRTEEDKQENQ
PSTSKRTRPKINRDPMSQVRHMSGELTPTISEVYHERSIGLGLAPPLAELLLAEDSKTEM
RTASSSENLLLQNVEKLGLLGDTTENAERWGVSTNSRPWLSTAPLETDVQGSDLTTAEII
ERQNKFKKDTEPKRKEENAYDLKPKEETPGPSGIEKRSVSPFLELSKRDEGDGRSIADSH
SSYKTLVLNPRPPYLPEEGESSKSHEGGKTHPRIRRPPVRTRPTYTTLDFPPSK
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacgcgacttctccgaggttgagccttctggctcatcatctcttggagctgca
tcaagagctgtcttcgtggagaaggtgagagcttcgaacgccgcgtgccaggccggtgac
ttcaccacagcggtcgctctctacacagatgccctgaccctggacccagctaatcatatc
ctgtacagcaatagatctgctgctagacttaagcagggacagttcgcagccgctcttcaa
gatgcaactcgtgcgcgggaactttgccctaattggccaaaggcttactatagacaaggt
gtggcattgcaatgccttggtcgtcacggcgaggcgttggccgcattcagctcaggactt
ggagtggagccgtcatcacgtcaacttctggcctccttagtagaggcctcattgaaatct
ccgctgcgaaacactctggaaccaacgttcaggcagctggaagctatgaaacttgatcaa
tctccttttgtgttaatatccgtggttggacaggaactcctagcagcaggccattaccag
gctgctgttacagttctggaagcagcgctgaggataggatcctgttccttaaagttaagg
ggatcagtgttcagcgctttatcatcagctcattgggcgctcagccaactggatgcagca
ataaactacatgcagcaagacctggccgttgccaagtctctcggagacacggctggggag
tgcagagctcatggaaaccttggtgcagcgtacttcagccaggggtcctataaagatgca
ttaactgcacatcgctatcagctcgtattggctatgaagtgtaaggacacatatgcggcc
gcagcggcgctgacctcgttaggccacgtgtacacagctatcggggactactccaacgca
ctggccagtcacaagcaatgcgtgcagctcgtgaagcaaatgggtgacaagctgcaagaa
gcacgggagatcgggaatgtcggcgcggtttaccttgcaatgggggagtttgattcagcc
gtggactgtcacacgcagcacatcagactagcaaggcgacttggtgatcaagtggaagaa
gcacgggcctattcgaacctgggttcttcgtatcattacagaagaaatttcacacaagct
atcgcgtaccatgagaatgtgctgaggatagctcagaaccttggtgaccgagctattgaa
gcgagggcctacgcaggtctcggtcatgctgcaaggtgtgccggtgattatgctcaagca
aaaaaatggcatgaaagacaattggacgtagcactagcagctagagacaaggttggagaa
ggacgcgcttgttcaaatctaggtattgtctaccaattactgggagaacatgacgcggcc
ttgaaactgcatcaagctcatctttcaatagcccggcagttacaggacaaagccggaatg
ggcagggcgtacgggaatataggtaacgcatactccgccgccgggttctatgaacaggcc
atcaaataccacaaacaggagctcaccatctccaaggaagtgcatgatagaagctccgaa
gcctcgacccatgggaacctagctgttgcgtaccaggccctaggagctcatgatatggcg
ctatttcattatagagctcatttaggaattgctcgagagctgaaggacacggcgggggag
gcctgcgcactcctaaacctcgggaactgcctctcgtctagaggagagtttgctcaggca
gtcccctactacgaacaacatctgatgctgtcccaagaactcggcgacgtcactgctgaa
tccaaagcctgtcatttcctgggctatgcccactactgcctcggaaatttcagagaagct
gtcagatactacgatcaagatctgtcactagccaaagatttacaagacaagatgaacatg
ggcagagcctactgcaatctaggtctggcacaccttgccctgggcaacctggagactgca
ctcgagtgtcaaaagtatttcctagccatagcccacatgacgcaacacttgcagggcaaa
tttagagctctgggcaatattggtgacgtgctgattaaaatgggagacgtcgaggaggcg
gtgaagatgtaccagcggcagcttggattcgcacgacaggcccgtgatcgatctttggag
gcagccgcgtgtggagctctaggacgcgccagaagactgcagagaaggttagacgctgct
ctaggacatcacacacaggagctaactctcagacaagaagcaggagacttggctggcgag
gcgcgagctcattcgcagctaggagctgttcacgtggtgctgggcaactactcgcatgcg
gccacctgctacagggaacaattagaacgggcgcaagagttacaagattgtgctttggag
gcacaagcgtacggcaacttgggtatcgtcaaacttaatatgggacattacgaagatgct
attggttactttgaacagcaactggcgatactggagcgagtaaacacacccacgtgtcat
atagaccgcgctgaagctttgggcttcctcggcaattgctacgatgctctcggggaccct
gatgaagccctgaagtaccatgagcagcatctagcggccgcattgaaactcaacagtgca
agggaacaagaacgagcgtatacaggccttgcgatgacatacaagtcgatgggaaatctc
cagcaagctctggtctgtctggaaaagcgcctggtggtagcgcacgagctcggagatcca
gttgcaaaggcccacgcgtacggagaactgggtgctttacacatctcactcaacaactta
gaacaagccgtatcatgcttggaacacaagaagaacattgcgaaagaattagccaatcgg
ataatggaagcggaagcatgtcacgccttgggcgcggcgcaccaagcgctcggcgagcat
gctactgcgctgaaacaccaccgagccgagcttgagctcgccaacgcgctcggcttgaca
cacctacagggtcgtgcttgcggcggtctgggagccgcgcacgcagcgacgggcgcacac
gccgaggcggcccgctggcacgagtctcgattgaggcatgctactgcttctggtgacagt
cgcggcagagctaatgctctcgcagacctgggtcgagctcatctcgccatgggcgcatgt
gggagcgctgtgtcctacctgagacagtcacttgcagccaccgaaggtctagctgatgct
gatgaggagtctcgagttcgtcacagactcgggttcgctttgtgggcgtctggtgagctg
gaagaagcgaaggaccagttgcaagcagcgctgaatgttctggagtccagcaatgagaaa
cacagggacagaaagatggcagcgttgtatacatcaacacaacacgcactgcagagggtc
ctagttgagctgggtcgagaaggtgaagcattgttagtggcggaacgaggccggtgtcgc
ggcttggacactttggacaaacatgtgtcatcacagaacagtgatgttcataacatgcag
agaaacgttacagaggatggaaacaaagaaagagtggagcaatggctgccgtcgagtgtt
gatcatatcctggaagtggtaaacaagctgaaagcacccgtgttgtactacagcctggca
gctggaagactttattcctggcttatccaaccacataaaggaatattgaggttccaccaa
gtgtcgctgatagaccaagtggaagatggtgacaacagtctccccgacatcagcgccgat
gatcttaaaaccaacaccaatgtggttaagctggagcggtgtataaatgaatggtctacc
tggttgaagacggctgaacgcagagacgaagagtgggaaccagacgacagaccgagcact
ggtctggctagaatagtaaatcgtaatcatttgctgaactcttcaaattactcactcagt
tcgctgttcagcgtgggctcagttggaggctctgtggctggttccgtggcgagtttgcaa
ggatctacaagatccagtatccacgggccacgcaagaacaagccgtcgtggcaaggaccg
ccgtgtctcctggacctttatcaaatgcttctcgcgccattcgaagatttgttgccggct
tcgtgtaacaataaccacgcgtcgcacagccaccgagggtgtggcggtcgtcgggagctg
atcctggtggtcgagggagccctgttcgcgtgtccatggggggcgcttcgagcgggcgct
gacgccgagcctctgtgcgagagatacgcactcctggccgcgcccgccatcaaaccgctc
agacctcacaaacataacaggcagaatcgactccgctctgaacatggtacatccaacaat
gagtcagggatgaggtcgctagtgattggcggcgcccgggtgggtgggtcgcggtggtcg
tctcaccctgccctgctgaaggaggctgagctggtcgctgacatgctgagggttactccg
ctcactgactatcaagcatcaaaggaagcagtaatagcccagcttcctcaagccgagtgc
atacactttgctacacatgtgtgctggaagacatcagcaattgtacttagccctggagaa
gttgtggattcacaagcaaaaaggctgaattcaagtgtggggggcaatgctgccgataca
tcgaccgaaacagaggaagaaaatgcagatataatatcgcatagcaatgaagatctgcca
cctatttcagaattcatgctgacagcatccgaaattatgaacttgaagttgactgcaaga
ttggtagtaatatcatgcgcgccatctacatctgttatcgaagaatcggatagttcagat
gcagtaacgaaggccggtgagggagtgtctcggctctgcagggcactgctcgctgctggg
gctcaagctatactggtcacgttgtggccggcgcctcaagatactgccactaagatactg
tatagggcactgtattctgcacttctacaaggaagcagggttgccaaagctctgggcgac
gccatgcagaccgtgcggcacacgaagcacttcgcacatcccgcacactgggccggctgc
gtgttgctgggcagcaacgtgcgtctcagcaacaaggtggcgctcatgggacaagcgctg
tgcgagttactagcgtcacccgccccccactgcagggacgcgttgcgagtttgccttcac
ttagttgagaagtctcttcagcgaatagtgcgagggcagaagaatgccatgtacaccaca
cagaagagtatagagaataaagctggaaacgtcagcggatggagggagctgctcatgagt
gttggatttagattcgagccagccgctaacggtattccatctagcgtgttcttcccgcag
agtgaccctgaggaacgcctcacgcagtgttctgctagtctacaggcacttctaggttta
acccccaccacgttgcaagcgctgtcgaagttgatagccaacggtgacgtggctgatgac
atcatatccgtcatacgatccatcatctcgcagttctcagtgaagagttctgacaccgat
accattgaggtttctgtcaacgttaggttatggcgtgtgagcggttgtcacgagctcttg
gcctcgctcggtctcgatctggcggaggtaggccaggatgacgtcactctccgcggcaag
gcgaccaacagacgacacgtgcacttcgttctacaagcgcttcttgcactatttgacaca
caagaagccccaagaagcttgagtttggagtccagctccagcgtggaatccttggcgtct
attgacgatggagatcttgaacctcattccgacggcgaaatatcacagaaacaacaaaga
caagactccgcatcatcagtacccccgccgcctctgccattaggttcgtgcggcggtgcc
ttcacgatgtacgtgcgtggatccggagcaagcagcgaggtcggtagaggagagccagat
gggcgcacagcccctccccccgcaccgcccccaccccgctaccgaggagagagtgacgca
gcgttcactccctctccccccgctgcacaacaaaacgtctcccttgccctagcacaccaa
accaaaatacgcacactatacaccagaagacccccatctgacgactctgactgggagagc
tctggacatgataccgtcctcagaaggcgacctgaccttcagcagcggtatttcgatgct
tgctattatttagtctcagaacaacgcagaagaactgaagaagacaagcaagagaaccag
ccatctacatctaaacgtacacgaccgaagatcaacagagaccccatgtctcaagttaga
cacatgagcggcgaattgactccaactatctcagaagtgtaccatgaaagaagtattgga
ttgggacttgcaccaccacttgctgaacttcttttggcagaagattcaaagactgaaatg
cgtactgctagttccagtgagaatcttcttttgcagaatgtagaaaagttaggattattg
ggtgatacgactgaaaatgcagaacgttggggagtttctactaactccagaccttggcta
tccacggcaccactggaaactgacgtccaaggttctgacttaacgacagcggaaattata
gagcggcaaaataaattcaagaaagacacagaacccaagagaaaagaggagaacgcttac
gatctaaaaccaaaagaagagactccaggccccagcggtatagagaaacgctccgtgtca
ccatttttagaattgtcgaaaagagacgaaggagatggaagaagtattgcagattcacat
tcatcatacaaaacattagttttgaatccacgcccgccatatctacctgaagagggagaa
tctagtaagagtcacgaggggggtaaaacacatccacgaattagaagaccacctgtacga
actagaccaacttataccacattagattttccgcccagtaaatga
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integrated database retrieval system
