Leptidea sinapis (Wood White): 126974053
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Entry
126974053 CDS
T09272
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04517
IgSF CAM signaling
lsin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126974053
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126974053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsin04812
]
126974053
Cytoskeleton proteins [BR:
lsin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126974053
Intermediate filaments
Intermediate filament-binding proteins
126974053
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
DUF5424
Motif
Other DBs
NCBI-GeneID:
126974053
NCBI-ProteinID:
XP_050677383
LinkDB
All DBs
Position
31:complement(9426023..9649949)
Genome browser
AA seq
2383 aa
AA seq
DB search
MTTDISVSRWDPTIGRTSGQEIIDEIEYDGGNSSSRLFERSRIKALADERQSVQKKTFQK
WVNSHLVRVGCRISDLYVDMRDGKMLIKLLEVLSGERLPRPTKGKMRIHCLENVDKALQF
LREQRVHLENMGSHDIVDGNPRLNLGLIWTIILRFQIQDITIEETDNKETKSAKDALLLW
CQMKTAGYNNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLHRNNPMHNLNNAFNVAE
DKLGLTKLLDAEDIAVEHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDK
MMQEYESLTSDLLQWIERTIEALGDRTFANSLEGVRQQLIQFANYRTVEKPPKFVEKGNL
EVLLFTLQSRMRAANQKPYTPREGRMIHDINRAWERLEKAEHERELALREELIRQEKLEQ
LAARFNRKAQMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVV
AVCGELQAERYHDMERVCARRDNVLRLWAYLLELLRARRARLELSLQLQQNFQEMLYILD
SMEEIKMRLLTDDYGKHLMGVEDLLQKHALLEADINVLGERVKVVVGQSQRFLEQEEGGY
RPCDPAITVERIQQLENAYAELVHLAVERRKRLEDSRKLWQFYWDMADEENWIKEKEQIV
SVDDIGHDLTTVYLLISKHKALEADVHAHEPQLMSVAAVGDELVSQGHFGADRIQERLRD
ILSQWNHLLDVVSLRKVRLDAAVRYHQLFADADDIDNWMLDTLRLVSSEDTGVDEAQVQS
LLKKHKDVTDELKHYANVIQQLKQQASELSPEDASSPEVRERLGAMDARLNDLSELARLR
KQRLLDALSLHKLLGEADAADQWIAEKDRMLDTMHPPKDIDDVEIMKHRYDGFDKEMNAN
ASRVAVVNQLARQLIHVEHPEAPRIQERQTKLNQAWSELREKAEAKKDELKSAQGVQTFY
IECGETVSWIEDKKRILQQTDNLEMDLNGVMTLQRRLSGMERDLAAIQARITSLEDEASA
IEGDHPDEARLIRDRIETISGNWEQLTQMLKERDAKLEEAGDLHRFLRSVDHFQTWLTKT
QTDVASEDIPSSLPEAEKLLSQHQTIKEEIDNYKDEYAKMMEYGQKITAEPSTADDPQYM
FLRERLKALGEGWAELQQMWENRQHLLAQSLELQLLQRDARQAEVLLAHQEHRLAKTEPP
TNLEQAENTIKEHEAFLTTMEANDDKINSVVQFANRLVEERHFDADKIQRKAESIRARRD
SNREKALQQLEKLQDQLQLHQFLQDCDELAEWVQEKNVTAQDDTYRSAKTIHSKWTRHQA
FEAEIAANKERLYAVQNAAEELMKQKPEFVEIISPKMQELQDQFENLQTTTKDKGERLFD
ANREVLLHQTCDDIDSWMNELEKQIENTDTGTDLASVNILMQKQQMIETQMAVKAKQVTE
LETQAEYLQKTVPDKMEEIKEKKKSVEQRFEQLKAPLLDRQNQLAKKKEAFQFRRDVEDE
KLWIHEKMPVATSTDYGNSLFNVQMLQKKNQSLRTETDNHEPRILTVISNGQKLIDEGHE
DTPEFKKLIDELSARWRELKDAIEQRKENLSQWEKAHQYLFDANEAEAWMSEQELYMMVE
DRGKDEISAQNLIKKHEILEQAVDDYANTIRQLGETVRQLTSEEHPLSEQISVKQSQVDK
LYAGLKDLAGERRGKLDEALRLFQLSREVDDLEQWITERELVASSQELGQDYEHVTLLWE
RFKEFARETQAVGSERVATAERIADQMIAMGHSDNATIAQWKEGLKETWQDLLELIDTRT
QMLAASRELHKYFHDCKDTLQRVNEKARGVSDELGRDALSVSALQRKHHNFMQDLSTLHT
QVEAIKSECARLGASYAGEKAAEISRRAGEVAAAWDALQAACAARRDKLDHADQLYRFLA
QVRTLLRWMDDLVRSMNTGEKPRDVSGVELLMNNHQSLKAEIEAREENFTSCIALGRELL
ARQHYASADIRDKLHALTEQRNALLRRWEERWENLQLILEVYQFARDAAVAEAWLIAQEP
YLMCQELGHTIDEVESLIKKHEAFEKSAAAQEDRFSALTRLTTFEVKEMKRRQEAAEAAE
RERREREEAEAAAAAAQDAVDRAASPEPPQPEASSKSAPPPEPAPSDNTRIVPDTPPPTS
PSTSKQTPAKPARASMAGTSSSPATPSSSGKVKSRSRSKSPFRSFRWRTAKKLLSGTHHS
DDEEGASPGSEDEGVEGMLVRKHEWESAAKRASNRSWDKVFVVAKDGRMSFYKDAKAYKS
APDQHWRGEAPLDLNGAVVEQATNYTKKKHVFRLRLSSGAEFLLQAPEEAEMSWWVESLR
ARTAAPAPRSHTLPAPAPHEPKRRSFFTLKKKSVRTLSYLFSP
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcagtgtcccgctgggaccccaccatcggcagaacctcgggccag
gagatcatcgatgagatcgagtatgacggcggcaactcctcgtcgaggctattcgaacga
tcgcgcatcaaggcgcttgcagacgaacgacagagcgttcagaagaagacgttccagaaa
tgggtgaattctcacctggtgcgagtggggtgccgcatcagcgacctctacgtggacatg
cgcgacggcaagatgctcatcaaactgctcgaggtgctgtccggagagagactgccacga
cctacgaagggcaagatgcgaatccattgcctggagaatgttgacaaagctcttcagttc
ctgagggagcagagagtgcacttggagaacatgggatcccacgacatcgttgacggaaat
ccgaggctcaacctcggtctcatttggactatcatcttgcggttccagattcaagacatc
acaatcgaggagacagataacaaggagacgaaatcagcgaaggacgctctcctcctgtgg
tgtcagatgaagactgccgggtacaacaacgtgaacgtgcgaaacttcaccacctcgtgg
cgcgacggtctcgcgttcaacgccatcattcacaagcacagacccgacctgatacagttt
gagaagcttcaccggaacaatccgatgcacaacctcaataatgccttcaatgttgccgag
gacaaacttggcctcaccaaactcttggatgctgaagatatcgctgttgagcatcccgat
gagaaatccatcataacttatgtggtgacctactaccactacttcagtaagatgaagcag
gagacagtgcagggcaagaggatcggcaaggtggttggcatcgcgatggagaacgacaag
atgatgcaggaatacgaatcgctgactagtgacctgctgcaatggatcgagcggacgatc
gaagcactaggagatagaacattcgccaactcattagagggagtgagacagcagctgatc
cagttcgctaactaccggaccgtcgaaaaaccacccaagttcgtggagaaaggtaacctg
gaggtcctgctgttcacactgcagtcccgcatgcgcgccgccaaccagaagccgtacacg
ccgcgcgagggtcgcatgatccacgacatcaaccgcgcctgggagcgactcgagaaggcc
gagcacgagcgggagctggcgctgcgcgaggagctcatccgccaggagaagctggagcag
ctggcagccagattcaaccgcaaagcccaaatgcgtgagacttggctatcggagaaccag
aggctggtcagccaggacaacttcgggttcgacctggccgctgtggaggctgctgccaag
aagcacgaggccatcgagactgacatcttcgcttatgaggagcgcgtgcaggccgtggtt
gctgtgtgcggggagctccaagctgaaaggtatcacgacatggagcgtgtgtgtgcgcga
cgtgataacgttctgcggctgtgggcctacctgctggaactactgcgagctcgtcgcgct
cgcctcgagctcagcctgcagctgcagcagaacttccaggagatgctgtacattctggac
tcgatggaggagataaagatgcgtctgttgacggacgactacggcaaacacttgatgggt
gtagaggatctgctgcagaagcacgcgctgctcgaggctgacatcaacgtgctcggggag
agagtgaaggtggtggtgggccagtcgcagcggttcctggagcaggaggagggcggctac
cgaccctgcgaccccgccatcaccgtcgagaggatccagcagctcgagaacgcgtacgcc
gagctggtgcacctggccgtggagcgcaggaagcgactggaagacagccgaaaattgtgg
caattctactgggatatggctgacgaagagaactggatcaaggagaaggaacagattgtc
tccgtcgatgacattggacatgatctcacaactgtgtacctgctgatatcgaagcacaag
gctctggaggccgacgtccacgctcacgagccgcagctgatgagcgtcgcggccgtgggc
gacgagctcgtgtcgcagggacacttcggagctgaccgcatacaggagcggctgcgtgac
atcctgtcccaatggaaccacctgctggacgtggtgtcgctgcgcaaggtgcgcctggat
gcagctgttcgctatcaccagctgttcgccgacgccgacgacatcgacaactggatgctc
gacacgctcagattggtatcgtcagaggataccggggtggacgaggcacaagtgcagagc
ctgctgaagaagcacaaggatgtcaccgacgagctcaaacactacgcgaacgttatacag
caactcaaacaacaggcgagcgagttgtcccccgaggacgccagcagcccggaggtgcgc
gagcggctgggcgccatggacgcgcgcctcaacgacctgtcggagctggcgcggctccgc
aagcagcgcctgctggacgcgctgtcgctgcacaagctgctgggcgaggccgacgcggcc
gaccagtggatcgcggagaaggaccgcatgctggacaccatgcacccgcccaaggacatc
gacgacgtcgagattatgaagcacagatacgacggattcgacaaagagatgaacgccaac
gcgtcgagagttgccgtggtcaaccagctggcgcggcagcttatccacgtggagcacccc
gaggcaccacgcatccaggagcgacagaccaagctcaaccaggcctggagcgagctccgg
gagaaggccgaagctaagaaggacgagctgaagtctgctcagggcgtgcagacgttctac
atcgagtgcggcgagaccgtgtcctggatcgaggacaagaagagaatcctgcagcagaca
gacaacttggagatggatctcaacggtgtgatgaccctacagcggcgcctgtcgggcatg
gagcgagacctggccgcgatccaggcgcgcatcacctctctggaggacgaggcttccgcc
atcgagggagaccatcccgacgaggccaggctcatccgcgaccgcatcgagaccatctcg
ggcaactgggagcaactcacgcagatgctgaaagagcgcgatgccaagttggaagaagct
ggtgatctgcaccggttcctgcgctccgtggaccacttccagacctggctcactaagact
cagactgacgttgcatccgaagatattccttcgagcttgccggaagcggagaagctccta
tctcagcaccagacgatcaaggaagaaatcgacaactacaaggacgagtacgcgaagatg
atggagtatggacagaagatcacggctgagccatcaaccgcagatgatcctcaatacatg
ttcctccgcgagcgcctgaaggcgttgggtgagggctgggcagagctgcagcagatgtgg
gagaaccggcaacacctgctcgcacagtcgctggagctgcagctgctgcagagagacgcg
cgccaggctgaggttcttctggcgcaccaggagcacagattggcaaagaccgagccacct
acaaatctggaacaagctgagaacacgataaaagagcacgaggcattcctcactaccatg
gaagctaacgacgacaagatcaactctgtggtgcaattcgcgaaccgactcgtcgaggaa
cggcacttcgatgccgacaagatacagcgcaaggctgagagcatccgagctaggcgcgac
tccaacagggagaaggcgcttcagcaacttgaaaaacttcaagaccaattacaactccac
cagttcctccaagactgcgatgagctcgccgaatgggttcaagagaagaatgtcacagct
caagacgatacgtaccgctcagcgaagactatccattctaaatggacgcgccatcaagcg
tttgaagcggaaatagctgcaaacaaagaacgcttatatgccgtccagaatgcggctgag
gaactgatgaaacagaaaccggagttcgtcgagatcatatctccgaaaatgcaagaactt
caagatcaattcgagaatctccaaacgacaacaaaagacaagggagagcgacttttcgat
gcaaaccgcgaggtgctattacaccagacatgcgacgacatcgactcgtggatgaacgag
ctcgagaaacagatcgaaaacacagacacaggaactgacctcgcctctgttaacattcta
atgcagaaacaacagatgattgagactcagatggcagtcaaggctaagcaagtgacagaa
ctagagacccaagcggagtacttgcagaagactgtcccagataagatggaagagattaag
gaaaagaagaagtctgtagaacaacgtttcgagcaactcaaagcgccattgctggatcgt
caaaaccagctcgctaagaagaaggaagccttccaattccgtcgcgacgttgaagacgaa
aaactatggatacacgagaagatgccggtagctaccagcactgattatggtaattccttg
ttcaacgtgcaaatgcttcagaagaagaaccagtccctgaggacagaaacagataaccat
gagccaaggatactgacagtaatctcgaatggacagaagctgattgacgaaggacatgaa
gacacgcccgagtttaagaagcttatcgacgagctatctgcgaggtggcgagaacttaaa
gacgctatcgaacaacgaaaagaaaatctgtcacaatgggagaaggctcaccaataccta
ttcgacgccaacgaggcggaggcctggatgagcgagcaggagctgtacatgatggttgaa
gaccgcggcaaggacgagatctccgcacagaacctcatcaagaaacacgagattctggag
caggcagtggacgattacgccaacactatccgccagcttggcgaaactgtgcgccagttg
accagcgaggaacatccactcagtgagcagatatctgtgaagcagtctcaagtagacaag
ttgtacgctggcctgaaggacctggcgggagagcggcgcggcaagctggacgaggcgctg
cggctgttccagctgtcgcgcgaggtggatgacctggagcagtggatcacggagcgggag
ctggtggccagctcgcaggagctcggacaggactacgagcacgtcacgttgctgtgggag
agattcaaggagtttgcacgtgaaacccaagccgtgggctcggagcgagtggcgactgcg
gaacgtatcgccgatcagatgatagccatgggacattccgacaacgcaactatcgcacag
tggaaggaggggctcaaggagacgtggcaagacctgctcgagctcattgataccaggacg
cagatgcttgcggcatcgcgcgagctacacaagtacttccacgactgcaaagacacgctg
cagcgcgtcaacgagaaggcacgtggcgtgagcgatgagctcggccgcgacgcgctctcc
gtgtccgcgctgcagaggaaacaccacaacttcatgcaggacctctccactctgcacact
caggtggaggccattaagtcggagtgcgcgcggctgggcgcgtcgtacgcgggcgagaag
gcggcggagatcagccggcgggcgggcgaggtggcggcggcgtgggacgcgctgcaggcc
gcctgcgccgcgcgccgggacaagctggaccacgccgaccagctgtaccgcttcctggcg
caggtgcgcacgctgctgcggtggatggacgacctggtgcgctccatgaacaccggcgag
aagcccagggatgtcagtggtgtggagctgctaatgaacaaccaccagagtctgaaggcg
gagatcgaagcccgcgaagaaaacttcacatcctgtatcgctcttggccgagagctgctg
gccagacagcattacgcgtccgcggacatccgggacaagctgcacgcgctcactgagcag
aggaatgcgctgcttcgtcgctgggaggaacggtgggagaacctgcagctcatcctggag
gtgtaccagttcgctcgcgacgcggccgtggcggaggcctggctgatcgcacaggagccc
tacctcatgtgtcaggagctgggccacaccatcgatgaggtggaaagcctcatcaagaag
cacgaggccttcgaaaaatcggccgctgcacaagaagaccggttcagcgcgctcacgcga
cttaccaccttcgaagtcaaggagatgaagcgtcgtcaagaagcggccgaggctgcggaa
cgtgagcgccgcgagcgggaggaggctgaggcagcggcggcggccgcacaggacgccgtc
gaccgcgccgcctcgcccgagccgccgcaacctgaggcgagtagcaagtccgccccgcct
cctgaacccgctccctcggacaatacccggatcgttcccgatactccgccgccgacaagt
ccttcgacgtcgaaacagacgcccgctaaacctgcacgtgcatccatggccggcacgagc
tcgagtcccgcgacaccgtccagctccggtaaggtgaagtcgcggtcgaggagcaagtca
ccgttccgcagtttccgatggcgcactgcgaagaagctgctcagcggaactcatcacagc
gacgacgaagagggcgctagtccgggcagcgaggatgaaggtgtggagggaatgttggtg
cggaaacatgagtgggaatctgcagccaagcgtgcctccaacagatcatgggacaaggtg
ttcgtagtagcgaaggacgggcgcatgtccttctacaaggatgcgaaggcttacaagtct
gcgcctgaccaacactggcggggcgaagcgcccttggacctcaacggagcagtcgtggag
caggccaccaactacactaagaagaagcacgttttccgacttaggctgtccagcggcgcc
gagttcctgctgcaggcgcccgaggaggcggagatgtcgtggtgggtggagtctctccgc
gcccgcacggccgcgcccgcgccgcgctctcacacgctgcccgcgcccgcgccgcatgag
cccaagcggcgctccttcttcacgctcaagaagaagtcagtgcgcacgctctcctatttg
ttctcgccttag
DBGET
integrated database retrieval system
