Leptidea sinapis (Wood White): 126974060
Help
Entry
126974060 CDS
T09272
Name
(RefSeq) transcriptional regulator ATRX homolog
KO
K10779
transcriptional regulator ATRX
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsin03000
]
126974060
03036 Chromosome and associated proteins [BR:
lsin03036
]
126974060
Transcription factors [BR:
lsin03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
126974060
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
126974060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
126974060
NCBI-ProteinID:
XP_050677401
LinkDB
All DBs
Position
31:complement(10363350..10410012)
Genome browser
AA seq
1158 aa
AA seq
DB search
MANLPGLTENVLLQPESSSDAASINDSDVEELPRVPVTEVNGDGLVEHMAKDDLLDDSDS
SSSQKDIRSSQDDKNKDESDNDDVKSKRRKANTISSDSEAGSSRKKEQKTSDFEESDEEN
SEPAKNKKRKKLPMPSDSDYSDSSSTKEKKKRRRIKVVEESDGSGSDTENEGKNKHGRKN
IRKVMGKNQLEEATKRAAREEKERIARITERQKLYNNLQFDESGKPDEVVLDKVVLDFDP
ETKEPLIEVDKGLVKKLKPHQANGIKFMWDACFESVKRIKKDKGSGCILAHCMGLGKTLQ
VVSLTHTLLIHSELTSVNRVLVVCPLSTVLNWVNEFKIWLKHADNDFEVDVYELSRYKQN
KERASQLQQWFQNGGVCVLGYEMFRNLSAENSKKYKKKMLKNFQESLVDPGPDLVVCDEG
HLLKNEKTSLSQAMNRVLTRRRIVLTGTPLQNNLKEYYCMVQFVKPNLLGKYNEYLNRFV
NPITNGQYTDSTEHDIRVMKRRSHVLHKMLDGAVQRRDYGVLAPFLPPKHEYVLFITLTE
VQIKLYQFYLENYSRRPLAGKSSGFLFPDFQSLQRIWTHPLVLKYNSDRYEIMQQKKRDK
EEEDYDSEGSLVNFIDDNSTTEESTTEESSDDMSDISDDSRKKSKKKKSKKKGKDKAYTP
RGTRANPVEHEEIDQEVVEVKNDNPTEWWMPLVTEQEIDDMRNSHKLILLFDILRQCDAI
GDKLLVFSQSLYSLDLIEHFLGKVDDATQEGRVDEKLGGHIGTWSPGVDYFRLDGSTSCE
NRSIWCKNFNREDNPRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDVQSIFRVYR
FGQKKPCYVYRFLAMGTMEEKIYERQVTKQAISKRVIDEQQIDRHYAENDLAELYKFEPE
PPQPRPIPPLPKDRLFAEMLKDHEQLIYKYHEHDSLLENKEEETLTEEERKAAWDDFENE
KTRPPPVPFPSPYAMHNGMMSNLLAQQQQQMAFGTLAAILRKEMPTLTESQIRDMLPVVF
NSNPAMFGGYDYGMMQKLNDIYKYAPQPGILNPAMMNSVMNPATGGMGGSSGLQYEPPWQ
RQQQQQHQMRLQQLMQQQNQMGAKLYAGGLGSRDPIAMALQQQRARELMTGERTRPRGRP
PHSRLVAAPPDIVNLDSD
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttgccgggattaaccgaaaatgtactgttgcagccggaaagtagctcggac
gctgcgtctatcaacgacagtgatgtcgaagagttacctagagttccagttacggaggtg
aacggagatggtctggtcgagcacatggcaaaagacgacttattggatgatagcgactca
tcaagttcacagaaagacataagaagctctcaggatgacaagaacaaagatgaatccgac
aatgatgatgtcaagtcaaaacgccgcaaagcaaacacgatatcttctgactccgaggcg
ggatcgtcgaggaagaaggaacaaaaaaccagcgactttgaggagtccgatgaagaaaac
tcggaaccagctaaaaataaaaagaggaagaagttgccaatgccgagtgatagtgattac
tctgactcctcatctactaaagaaaaaaagaagaggcgtcgcatcaaagtcgtagaggag
agtgatggctcaggttcggatacagaaaacgaaggcaaaaataaacatggcagaaagaat
attcgtaaagtaatgggtaaaaaccaactcgaagaagcaacgaaaagagctgctcgtgaa
gaaaaggaaaggattgctcgaatcacagagcgacaaaaattgtacaataacttacaattt
gatgagtcgggaaagccagatgaagtggtgctggacaaggttgtgcttgactttgatcca
gaaaccaaggagccactcattgaggttgataagggtttggtcaaaaaattgaaaccacat
caggcaaacggaataaaattcatgtgggacgcatgtttcgagagtgtgaaacgtatcaag
aaggacaagggttctggttgtatactagcgcattgcatgggtctcggcaaaacattgcag
gtggtgtcactcacccacacgctgctgatccacagcgagttgacaagcgtgaaccgagtg
ctggtcgtgtgtccgttgtcaactgtactcaactgggtgaacgagttcaagatatggctc
aaacatgctgataacgactttgaagtggatgtctatgagctatccaggtataagcagaac
aaagagcgcgcgtcccagttgcaacaatggttccaaaatggcggcgtgtgcgtgctcgga
tatgaaatgttccggaacctctccgctgaaaactcaaagaagtataagaaaaaaatgctt
aagaactttcaggagagcttggttgatccaggccctgacttagtggtgtgcgatgaggga
catttactgaagaatgaaaagacaagcttatctcaggcgatgaacagagtgttgacaaga
cggcgaattgtgctcacgggaactcccttacagaataatctcaaagaatattactgcatg
gtgcaattcgtgaaaccgaaccttctggggaagtataatgagtacttgaatagatttgtc
aacccaataaccaatggacagtatactgactcaactgaacatgacattagggttatgaag
aggaggtctcatgtcttacataagatgttggatggagctgtacagaggcgagactatggt
gtgttggcaccatttttaccgccaaaacacgagtatgtactgttcatcacactcaccgaa
gtgcaaatcaaattataccagttctatttagaaaattattcaagaaggccactggctgga
aaatcttcaggattcctgttcccagactttcagtcactgcaacggatatggacacatcca
ttagtgctcaaatataattcagacagatatgaaatcatgcagcagaaaaagagggataag
gaggaagaagattacgattccgagggttctttagtgaactttattgatgataattcaaca
acagaggaatcaacaacagaagaatcaagtgatgatatgtcagatataagtgatgacagc
cgaaagaaaagtaaaaagaaaaagtctaagaagaagggcaaggataaagcttacacaccg
agagggactcgcgctaatcctgtggagcatgaagaaattgatcaagaggtcgtagaggtg
aaaaatgataatccaacagaatggtggatgccactggttaccgagcaagagattgatgac
atgagaaactcacacaaactcatacttctgtttgacatcctgaggcaatgtgatgctatt
ggtgataagctgttggttttctcacaatccttatactcgttggatttgattgagcatttc
cttggcaaagttgatgatgccacacaggagggcagggtcgacgagaagttgggtggacac
attggtacatggtcacctggtgtagactacttcaggttggatggttcgacttcgtgcgag
aacagatccatctggtgcaagaacttcaacagggaggataacccaagagcgagattgttc
ttaatatcgacgcgggctggaggcctcggtatcaatctggtggccgccaatcgcgttgta
atctttgacgtgtcgtggaatccctcgcatgacgtgcagagcatattcagagtgtaccgc
ttcggacagaagaaaccgtgctatgtttaccgtttcttggctatgggcacaatggaggag
aagatctacgagcggcaggtgacgaagcaggcgatatcgaagcgcgtgatcgacgagcag
cagatcgaccgccactacgccgagaacgacctggcggaactgtacaagttcgaaccggag
ccaccccagccacgccccataccgccgctgcccaaggaccgactcttcgccgagatgctc
aaagaccatgaacaactcatatacaaataccacgagcacgactcacttcttgagaacaaa
gaggaagagactctcacagaggaggagaggaaggcggcctgggatgactttgaaaacgag
aagacgagacctccgccggtgccgttcccctcgccctacgccatgcataatggaatgatg
tcgaatctgttagcgcaacaacaacagcagatggcattcggcacgctggcggccatactg
cggaaagagatgcccaccctgactgagagtcagatcagggacatgttgcctgtcgtgttc
aactctaacccagcgatgttcggtggatatgactatggtatgatgcaaaagttgaacgac
atctacaagtacgctccgcagcccggcatactcaatccagccatgatgaattccgtcatg
aatccagccacaggcggaatgggcggatccagcgggctgcagtacgagccgccgtggcag
aggcagcagcaacaacaacaccagatgcgcttacaacaactgatgcaacaacaaaaccag
atgggtgcgaagttgtacgctggagggctggggagccgcgaccccatcgcgatggcgctg
cagcagcaacgggcgcgcgagctcatgacgggcgaacggaccaggccgcggggtcggccg
ccgcactcgcgactggtcgccgcgccgcctgacattgtcaacctggactccgactag
DBGET
integrated database retrieval system
