Leptidea sinapis (Wood White): 126974070 Help Entry 126974070         CDS       T09272                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism lsin  Leptidea sinapis (Wood White) Pathway lsin04140   Autophagy - animal lsin04148   Efferocytosis Brite KEGG Orthology (KO) [BR:lsin00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     126974070    04148 Efferocytosis     126974070  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lsin04131]     126974070 Membrane trafficking [BR:lsin04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     126974070 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin TPR_Vps41 TPR_12 Beta-prop_RIG_2nd B129_C2H2-zf Motif Other DBs NCBI-GeneID:  126974070 NCBI-ProteinID:  XP_050677422 LinkDB All DBs Position 31:complement(5842591..5858171) Genome browser AA seq 875 aa AA seqDB search MHEAYEVTHLLNASVQIETIAAYDGNLLLGTRQGHLLMYSLSLNNDTKKYELKMLRYCKN FSKKPIQQIEVIPEDNLLLCLTDNMLSSYDINGVNFPLVNTFSDTKGASLFALDNKSATL MTGESNSVLQLCVAVRRKLQLYCGKKGEFKKHLFEFTVPDVPKVMSWGQQYLCVGFKGEY TYFDLSSHVSKELFPTSSSKSLEPTIAKYSDSSFLLGRDNTSVLVEEVAQVRQEAQARQE EQTGQEAQGIVIKKTIKWTDAPIAVVWDEPFVLGLLSQDNVVVQTVEPPMFIQTLPELNK ARLMYRCKRGLIFVSSVGQVWCLTSVDITKQRQQLLKDKQFQIAIDLMKLSECSPEEKKQ TIHSIQMLNAMELFDNKQYAQSMKEFIKLNTDPVDVIKLFPELDCKPGTESDDKKLKGKD LENAISALIQYLVDTRLAIGKALESREVKEDASNQRNVVQQLELIDTTLLKCYLQTNDAY VAPLLRLNNCRLEEAEKTLLQHGKHSELIILYQTKGQHTKALQLLKEQAKQADSSLKGYH RTKNYLQNLGAEHINLIFKFSDWILEEHPEEGLKIFTEDIAKVENLPRAKVLDFLLREHE PLVIPYLEHVIHTWNDTNSLFHDALVTMYREKITDKKANITEEELQHIKSKLVSFLERSS HYTPERIILHFPNDTLFEERAIILGKLDRHEQALAIYVHILGDVERAIRYCDNVWEKSND KSSGVYVILMKILMNPEQATPLTGPLANVPRHPRASIPDMETALAILEKHGDKISPIKAL SVLPDSVPLSRLKSFLECALETQLTTKRRTQLLKGLLYAEHTQVQEMKRFHESQSIIIND YNICPVCKKRFGNQSAFVRYPNGDIVHYSCRMDKY NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atgcacgaggcatatgaggtaacacatttgttaaatgcttctgttcaaattgagaccatt gcagcatatgatggaaatttactcttgggaactcggcaagggcatctcttaatgtactca ttgtctctcaataatgataccaagaaatatgagctaaaaatgttaaggtattgcaaaaat tttagtaaaaaaccgattcaacagatagaggtcataccagaagataatttactactttgc ctcaccgataatatgctctcgtcttatgatattaatggggtgaactttcctttggtaaac acattttctgataccaaaggtgcatcactgttcgctttagataataagtcggcaacatta atgacaggtgaatcaaattctgttcttcaattgtgtgtggcagttagaagaaaattacaa ctgtattgtggcaagaagggagaatttaagaaacatttatttgagttcactgtacctgat gtaccaaaagttatgtcttggggtcagcagtatttatgtgttggcttcaaaggagaatat acatattttgatctgtcttcacatgtttccaaggaactgtttcctacaagtagttcaaaa tctcttgagcccacaatagctaagtattctgactcgtcattccttttgggtcgtgacaac acctcggtacttgttgaagaagttgcacaggtcaggcaagaggcacaggctagacaggag gaacaaactgggcaagaggcacaaggaattgttattaaaaaaacaatcaaatggactgat gcacccattgctgttgtatgggacgaacctttcgtcctggggctactgtcacaagataat gttgtcgtgcagactgtggagccaccgatgtttattcaaactttacctgaattgaacaag gcaagactgatgtatagatgtaagcggggactgatctttgtctcgtctgttggacaagtg tggtgtctgacatccgtcgacatcactaagcagaggcaacagttgctgaaagacaaacag ttccagattgccatcgacttaatgaaattatcagaatgctcgccagaagagaagaaacaa acaatacattccattcaaatgcttaacgctatggagctatttgataacaagcagtatgca cagtctatgaaggaattcattaaactgaacacagatcctgttgacgttatcaaactgttc cctgaactagactgtaaacctggaaccgaaagtgacgataagaaattgaagggaaaagac cttgagaacgctataagtgcgttgattcagtacctggttgatacgcggttggcgatcggc aaggctctggagtctcgggaagtcaaggaagatgcttcgaatcagaggaatgtggtgcag cagctggagctgattgatactactctacttaaatgttatttacagacaaacgacgcctat gtagccccactacttcggctaaacaactgtcgccttgaagaagcagagaagacattgcta cagcacgggaagcatagcgagctgataatactctaccaaacaaagggacaacatactaaa gcactccagctacttaaagagcaagccaaacaagccgactctagcttgaagggataccat agaactaagaactatttgcagaatctgggtgctgaacatataaatctgatattcaaattc tccgactggattttggaagagcaccccgaagaagggctcaagatatttaccgaagatata gccaaagtcgagaatcttccccgtgcgaaggttctagactttttgctgcgggaacacgaa ccattggttattccgtatttggaacacgtcattcacacttggaacgatactaattcgttg tttcacgacgcccttgtcacaatgtaccgagagaaaatcacggataaaaaagccaacatt acagaggaggaactacagcatataaagtcgaaattagtttcgtttctggaaaggtcttcg cattacacgccagagagaattattctgcatttccctaatgataccctattcgaagagagg gctatcattttgggaaaactggacagacatgagcaggccttagctatttatgtacacatt ttaggagatgtcgaaagagcgattcggtactgtgacaatgtgtgggagaaatcgaatgac aaaagctcaggtgtttacgttatattgatgaagatacttatgaacccggagcaagccaca cctctgaccggcccgctggccaatgtccccaggcacccgagagcctctataccagatatg gagacggctcttgctatactggagaaacatggtgataaaatatcgcccattaaggctctg tcagtgttaccagattcagtgccgctcagtaggctgaagagtttcttggaatgtgctctg gaaacccagcttactaccaaacgacgtacacaactactcaagggactgctgtacgccgaa catacacaggttcaagagatgaagcgattccacgagtctcaaagtattataataaacgac tacaacatatgtccagtttgtaagaaacggttcggcaaccagagcgccttcgtccgatat cccaacggtgacatagtgcactactcgtgtcggatggacaagtattga

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