Leptidea sinapis (Wood White): 126974439
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Entry
126974439 CDS
T09272
Name
(RefSeq) WD40 repeat-containing protein SMU1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsin03041
]
126974439
Spliceosome [BR:
lsin03041
]
Complex B
Other components
Complex B specific factors
126974439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
LisH_TPL
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
PALB2_WD40
LisH_WDR26
WDR54
DUF7165
Beta-prop_WDR11_2nd
LisH_PAC1
zf_topless
VPS8_N
Motif
Other DBs
NCBI-GeneID:
126974439
NCBI-ProteinID:
XP_050677887
LinkDB
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Position
32:4565018..4583598
Genome browser
AA seq
529 aa
AA seq
DB search
MSIEIESADVIRLIQQYLKESNLTKTLQTLQEETGVSLNTVDSVDGFCADINNGHWDTVL
KATASLKLPDKKLMDLYEQVVLELTELRELGAARTLLRQTQPCLLMKQQEPDRYMHLENM
LSRSYFDPREAYGGAGVGAIAGGAGGGGGGKEWRRATLAAALAGEVSVVPSSRLLALLGQ
ALKWQQHQGLLPPGTTIDLFRGKAAIRDEEDDRCPTHVSKIIKFGQKSHVECARFSPDGQ
YLVTGSVDGLLEVWNFTTGKLRNDLRYQAHDNYMSMDEAVLSLAFARDSDTLAAGANDGN
IKVWKVSTGQVQRRLDRAHSKGVTCVQFSRDASQLLSASFDRTLRIHGLKSGKLLKEFRG
HASFVNDALFTPDGHGVLSASSDGTVRVWSARSAECTATYRPWGGAGGAPDPAVNSLLLM
PKNPEHFAVCSRSNTVVVMNMAGQVVRSLSSGRRDAEGGSLVCAALGARGRLLYCVAEDL
VLYAFCAASGKLERTINVHEKAVIGMAHHPHQNLLATYSEDGLLKLWKP
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatagaaatagagtctgcagacgttattcgtttaatacaacaatatcttaaagaa
tcaaatttaacaaaaacattgcaaactctacaggaagagactggtgtgtctctgaacaca
gtggacagtgtagacgggttctgtgcagacatcaacaatggccattgggatacagtgctc
aaggctacggcatctctcaagctgccagacaagaagctcatggatctgtacgaacaggtg
gtgttggagctcacagagctgcgcgagctgggtgcggcacgcactcttctgcggcagaca
cagccctgcctgctaatgaaacagcaggagcctgacagatacatgcaccttgagaacatg
ttgtcgcggtcgtacttcgacccgcgcgaggcgtatggcggtgcgggcgtgggtgcgatc
gcaggcggtgcggggggtggaggcggcggtaaggagtggcgtcgcgccacgctagcggcg
gcgttagcaggcgaggtgtcggtggtgccgtcgtcacgactcctggcgctgctggggcag
gcgctcaagtggcagcagcaccagggtctgctccctccgggcacgaccatcgatctgttc
cgcggcaaagcggccatccgagacgaggaggacgatcggtgccccacccacgtgtccaag
attattaagttcggacagaagtcgcacgtggagtgtgcccggttctcgccggacgggcag
tacctggtgacgggctcggtggacgggctgctcgaggtgtggaacttcaccaccggcaag
ctgcgtaacgacctccgctatcaggcgcacgacaactacatgagcatggacgaagccgta
ctcagcctggccttcgcgcgcgactcggacacgctggcggccggcgccaacgacggcaac
atcaaagtgtggaaggtgtcgacggggcaggtgcagcggaggttggatcgcgcgcactcc
aagggcgtgacgtgcgtgcagttctcgcgggacgcctcgcagctgctgtcggcgtcgttc
gatcgcacgctgcgcatccacggcctcaagtcgggcaagctgctcaaggagttccgcggg
catgcgtcgttcgtgaacgatgcgctcttcacgccggatgggcacggcgtgctaagcgcg
tcgtcagacggcacggtgcgggtttggtctgcgcgttcggcggaatgcacggccacgtac
cggccgtggggtggagcaggcggtgcgcccgaccccgctgtcaactcgctgctgctcatg
ccaaagaaccccgagcacttcgccgtgtgcagccgcagcaacacggtggtggtgatgaac
atggcgggacaggtggtgcggtctctatccagtgggcggcgtgacgcggagggtggctcg
ctggtgtgcgccgcgctgggtgctcgcgggcgcctgctgtactgcgtggccgaggacctc
gtgctgtacgccttctgcgcggccagcggcaaactggagcggaccatcaacgtgcacgag
aaggctgtgatcggaatggcgcaccatccccaccagaacctgctggcaacctacagcgag
gacggcctgctcaagctgtggaagccgtga
DBGET
integrated database retrieval system
