Leptidea sinapis (Wood White): 126974904
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Entry
126974904 CDS
T09272
Name
(RefSeq) uncharacterized protein LOC126974904
KO
K23956
FERM and PDZ domain-containing protein 4
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsin04990
]
126974904
Domain-containing proteins not elsewhere classified [BR:
lsin04990
]
Other domain-containing proteins
FERM domain-containing proteins
126974904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
WW
PDZ
RA_2
PDZ_2
FERM_F2
FERM_f0
PDZ_6
RA_3
DUF6288
Motif
Other DBs
NCBI-GeneID:
126974904
NCBI-ProteinID:
XP_050678583
LinkDB
All DBs
Position
34:6476166..6701724
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AA seq
1685 aa
AA seq
DB search
MLLQQASSSPGPSGTASPKLSCSSRTNPSPSFPRLNGSPVLSDAASSSSSPKLCGNSPKL
GNSLGASPKYGSPKLGGSPKCERGVLENGAALERLQTELKEGWTVHTGRDGRLYYCNHIT
RTASWLPPVENWPTRDDSASQEDAILPYGWEQALDSKEKSYYINHINKTTTYVAPESTSN
ETPPAPRDVVLERDPDLGFGFVAGSERPVLVRFVTDNSPSVGKLEPGDQILFVNGEDVSL
AAREQVISAVRSCSDRVTLRVCQPARSGNPARRSAFLSAAKRARLRARPTRVRFADSVQL
NGAPMYPPSAFSLGDLCLPPMANVLKVFLENGQTKSFKYDATTTVADVITSLKDKLCISA
EDHFSLVVEHVKSMRRNKLTLLDPKESLARIAARPGSHKMRCLYRIVFMPTSAAELAQQD
LAALEYLYLQCCNDVAQDRFVPELQPEVALRLAALHIHQHALAHNMAPAKLTVKAVEREF
GLERFVPCSLLESMKRKELRRLVAHFLKLNAQMTGGQRQLTQLQAKLHYLDIVGGLPSYG
AKCFSSTRPERVLLVSPRFALSQIVGRSNSVPQSIANFEEIESIRVKSEYSGSAEVVIFL
QRDRVLALLMDERDATEMPLVIAGYYKVATGKELNVEIERELLTEDIAPPYLSQHHVVPA
KWSYINYDDQALREKKHFAIFTMPPPYLSTPEQTKPLDNNMNSNIANRNSSNNSSPLLGH
SRSELDDIQFEKCKRSEFRLFDPNDPCFLDDGMGFDLQSVLSMELLESATNPKLVEAKNE
EVLRRVAEMQKLVENSEQYLTENCDVYNENVYNGILRDELVGRETCVDNIESDTESNTSR
MSEADAPGVLKHSDSLLLLTETISQGLSALTVAENKDKCSDLTVRQSQGLSAILNNCGLT
DALLALNSDMVYSESDNDSSYTPTSSPVRKHLNKPPNKAVRTSFGLVSPDLSGDCKEPNL
KEYLKQLREKSNREDNASEFYCQDSVVDTDAELIDLTLIPPPQTPDELDSAYQVPQILPV
VPPSFADDSDKDCVDGISEKGTELDEFIANVTVHPPTVKITPAIELTPEEIMSYIIPPPP
ISNTSTLDKEQPTYSNQSQLTDDSLKKQKNTNEAKYANGDVVKGALSVSEIRNMFTAKTL
SDARNSLLLKDKAKGQSKSDSPKSKRKSLNCEKQANGNAHIIEYPTVERKGMFSCCSKDK
NKNEDSDEMEQIESCLPNSDSMPDVCEVRPPPRRKSNEIKQPPERPPKTPPTPAPRPRSN
SFTCTNNELNVVEIPNNYNTLNSRKFSYKLVCDMNEGHIPPEIPPRLENVALSPPPPILL
PPKKPPLPPVPSIEVLRLKTSQKTFPVRNSERLASIGSPHFQRNLNSYRNLELESRLTDD
ESRSVRSTQNYSSLTLQNRHVRSNSETKNTILKNREMSTALSLCSPQMNRRFSNRPDILN
GAPVSDQRVFSPPLNERKIRKETPSPTPKVQNHVRFKEDVVDDIPTPPSPPSVKFLELQP
GNNGRVSIENLLRKTEVAVDGLLQRLHQVAQKCSHQHAHGGGEDIDEVKFQRARSELTSC
AVSLVGASRTLVGALGSASESAAATALADCLTPLRRLSDLAQALGRHTSAPLQTRNLVLR
VHDVTGAFKELAGADMARIIHDHNTKSLSPNSETNSTLEGQLALRAECLANVLATLLRSL
RVFSP
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcagcaggcctcttcgtcgcctggtcccagcggcacggccagtcctaaacta
tcctgcagctcacgtaccaaccccagtcccagcttcccaagacttaacggtagccctgtc
ctaagcgatgcagcgtccagttctagcagcccaaaactctgtggaaattctcccaagttg
ggaaatagtttgggagcgagccctaaatatggaagtcctaagcttggagggagtccaaaa
tgtgaaaggggagtgctggagaatggggcagctttggagagattgcaaactgaactgaag
gagggatggacagtccatacgggaagggatggcaggctgtattattgcaaccacatcaca
agaactgctagctggctgcctccggtggagaactggccaactagagatgacagtgctagt
caagaagatgctattcttccgtacggatgggaacaggcgctggacagcaaggagaagtct
tattacatcaatcacatcaacaagacaacgacctacgtggcgccagagagtacctcgaac
gagacgccaccggctcccagagatgtggtgctcgagagagacccagaccttgggtttggg
ttcgtggccggctccgagcgacccgtgctggtcaggttcgtgacggacaactccccgagt
gtcggcaagttggagccgggtgatcagatcctgttcgtgaatggtgaagatgtgagctta
gcagcccgcgagcaagtcatctcagcagttcgatcctgctccgacagagttacgctgcga
gtctgccagccggcgaggagtggcaaccctgctaggaggtcggcgttcctctccgcagcc
aagagggccaggttgcgagccagacccaccagggttaggtttgcagactccgttcagctc
aatggagcccctatgtaccctccttctgcattctctctgggtgatctctgccttcctcca
atggcaaacgtactgaaggtgttcctggagaacggtcaaacgaaatcatttaaatatgac
gcgacaacgaccgtggcagacgtcattaccagtctcaaagataagctttgtatctccgcc
gaggatcacttcagcttggtggtggaacatgtgaagagtatgagaagaaacaagctcacc
ctgttggatcccaaggaatctttagcgaggatagcggcacgacctggctcgcataagatg
cgctgtctctaccgcatagtatttatgccaacatcagctgcagaactagcgcagcaggat
ctagccgcgctagagtatctgtacctgcagtgttgcaacgatgtggcgcaggatcgcttc
gtgccggagttgcagccggaagtggcgttgcgtttggcagcgctacacatacaccagcac
gcgttggcacacaatatggcgcccgccaagctcactgtgaaagctgttgaaagggagttc
gggttggagcggtttgtgccgtgcagcttgctggagagcatgaagcggaaggaactacgg
cggctggtggcgcactttctcaagctgaacgcgcagatgacgggcggtcagagacagctg
acacagctacaggcaaagctccattatttggacatcgtgggcggactgccgagctacggc
gcgaagtgcttcagtagtacccgacccgagcgagtgttgctggtgtcgcctcgcttcgca
ctcagtcagattgtcggcagaagtaactctgtgccgcaatcaatcgctaattttgaggag
attgaaagcattcgagtgaagagcgagtactcgggcagtgcggaggtggtcatcttctta
cagagggacagagtgctggcgcttctgatggacgagcgagacgccactgagatgcctcta
gttatcgctggttactacaaagttgcaaccggaaaggaattaaatgttgaaatagaaaga
gaattattaactgaagatatcgcgccaccgtacttgtcacagcaccacgtcgtgcctgct
aaatggagctacatcaactatgacgaccaagcccttcgagagaaaaaacactttgcgata
tttacaatgcctcctccatacctttcaacaccagaacaaaccaaacctctcgacaacaac
atgaattccaatatagctaatagaaatagtagcaataattctagtcccttactaggacat
tctagatcagagcttgatgatattcaattcgagaaatgtaaacgaagcgaatttagactt
ttcgatccgaatgacccttgtttcttagatgatggaatgggctttgatttacaaagtgtc
ttatccatggagttattagaaagcgctacaaacccaaaacttgtcgaagctaaaaacgaa
gaagttctgagacgagtagcagaaatgcaaaagctggttgaaaattccgaacagtacttg
actgaaaactgtgatgtttataacgaaaatgtatataatggtatattaagagatgaatta
gttggtagagagacttgtgttgataacattgaaagtgatacggaatccaatactagtaga
atgtctgaagctgatgcccctggtgtccttaagcacagtgattctttgttgttactaacc
gaaactatcagtcaaggtttgagtgctttaactgtagcagaaaacaaagataaatgcagt
gatttaacagtccgtcaatcacaaggtcttagtgctatattgaataattgtggcctaacc
gatgccttgttggctcttaatagtgatatggtgtactcagaaagtgataatgattcatca
tatacaccaacaagcagtcctgtaagaaaacaccttaataagccaccaaataaagctgtt
agaacaagttttggcttagttagtcctgatcttagtggtgattgtaaagaaccaaatctt
aaagaatatttaaaacaacttagagaaaaatcaaacagggaagataatgcatcggaattc
tactgtcaagattctgtagtcgacactgatgctgagcttatagatttaacacttatacct
ccaccacagactccagatgaattagatagtgcgtatcaagtgcctcaaatattacctgtt
gttccaccgtcttttgcagatgatagtgataaagactgtgtggatggaatttcagaaaaa
ggcactgaacttgatgaatttattgctaatgtaacagtacatccacctacagttaaaata
acacctgctatagagcttactccagaagaaatcatgtcttacattattccccctcctcct
atttctaatacatcaacattagacaaagagcagccaacatatagtaatcaaagtcaactg
acagatgattctctgaaaaaacaaaagaataccaacgaagctaaatatgcgaatggagat
gtagtaaaaggagccttaagcgtgagtgaaattaggaatatgtttacagcaaaaacactc
agtgatgccagaaatagtctccttttaaaagataaggccaaaggtcaatcaaaatcggat
tcaccaaaatcaaaacgaaaaagtttaaattgtgaaaaacaagcaaacggcaacgcacat
attatcgaatatccaactgtagaaagaaaaggcatgttttcatgttgcagtaaagataaa
aataaaaatgaagatagcgatgaaatggaacaaattgagagctgcttacccaattccgat
tccatgccagatgtttgcgaagtccgacctccaccgagaagaaaaagcaatgaaataaag
caaccaccagaaagaccgccaaaaacaccaccaactccagcccctcgacctagatctaac
tcattcacttgcacgaacaacgaattaaatgtagtcgaaatacctaataactataacaca
ttgaacagcagaaaattttcttacaaattggtttgtgacatgaatgaaggccacatacct
ccagaaattccacctagattagaaaatgttgcgttatcccctcctcctccaatactactg
cccccaaagaaacctccactccctcctgttccaagcatagaagtcctaaggctaaaaacc
tcccaaaaaacatttcccgtgcgaaattctgaacgtctagctagcattggatcaccacat
tttcaaagaaatttaaactcgtatagaaatctagaattagaaagcagattgactgatgat
gaatctcgaagtgtaagatctacacagaactacagctccctaacgctacaaaatcgccac
gtaagatcgaattctgagacaaagaatactattctaaaaaaccgtgaaatgtcgacagca
ctttcactatgctcgccacaaatgaaccgacgatttagtaatagaccggatattttaaat
ggtgcgccggtgagtgatcagagagtatttagtccaccactaaatgaacgtaaaattcga
aaagaaactccaagtcctacaccgaaggtccaaaatcacgtgagatttaaagaagatgtg
gttgatgatattccgacaccgccgtcgcctccttcggtgaagtttctcgagctgcagcca
gggaacaacgggcgtgtgtctatagagaatctgttgcgaaagactgaggtagcggtggac
ggacttctacaacgactgcatcaggtggcacagaagtgctctcaccagcatgcgcatggt
ggcggtgaggatatagatgaagtcaagtttcagcgtgcccgtagtgagctgacatcatgc
gcagtatccctggtgggtgcgtccaggactctcgtgggagctctcgggtccgccagtgag
agtgccgcggccacggcactcgctgactgcctgacaccgttgagacggctctccgaccta
gcgcaggcgcttggaaggcatacatcagcaccactgcaaacaaggaatctggtacttaga
gtacacgacgtcactggagccttcaaggagctggcgggtgctgatatggcgcgtattatt
cacgatcataataccaaatctctgagcccgaattcagagactaattcaacgttagagggc
caactcgctttgagagcagaatgcttagccaatgtgctggcaactcttctaaggagcctt
cgtgttttttcaccatag
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