Leptidea sinapis (Wood White): 126975032
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Entry
126975032 CDS
T09272
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
126975032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126975032
04131 Membrane trafficking [BR:
lsin04131
]
126975032
03029 Mitochondrial biogenesis [BR:
lsin03029
]
126975032
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsin04812
]
126975032
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
126975032
mRNA cycle factors
P-body specific factors
126975032
Membrane trafficking [BR:
lsin04131
]
Others
Actin-binding proteins
Myosins
126975032
Mitochondrial biogenesis [BR:
lsin03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
126975032
Cytoskeleton proteins [BR:
lsin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
126975032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HIP1_clath_bdg
AAA_22
AAA_16
nSTAND3
Myosin_N
Motif
Other DBs
NCBI-GeneID:
126975032
NCBI-ProteinID:
XP_050678763
LinkDB
All DBs
Position
34:10963856..11065042
Genome browser
AA seq
1823 aa
AA seq
DB search
MTTKELYTKGAQVWVEHPVKVWESATVTSDFRSGVLIVQLDTSKEIRQIKIQDASSLPPL
RNPSLLIGQNDLTSLSYLHEPAVLHNLKVRFCDRNAIYTYCGIVLVAINPYSELPIYGDD
TIMAYRGQSMGDLDPHIFAVSEEAYTKLERERRDQSIIVSGESGAGKTVSAKYAMRYFAA
VGGNASETQVERKVLASSPIMEAIGNAKTTRNDNSSRFGKFIEIHFDNEYRISGASMRTY
LLEKSRVVYQSSGERNYHIFYQLCAAAEDMPDLKLDHQDSFHFLNQGGSPEIDGVDDYKA
FMDTKNALTTLGVTESEQQNMFTVLAAILHLGNVVFTSDPDIADPNNQDGAYIQSNDMHL
STACSLLGVSKPELSRWLTHRRIVSAHEVILSRMDVSRALFARDALVKRMYGEVFAWLVS
VVNRALNTGNAKKHFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNLHVFKLEQDEY
IKEEISWKMIDFYDNQPCIDLIEDRLGILALLDEECRVPQGSDMGFVGKLQDKCSKYPHF
LKPRFGNAAFIIKHFADKVEYQCGGFLEKNRDTVLEEQLECIKTSTSCRLIHTMFAEAAD
YSATLPAPRRRTTPSIPLASQTQVPRRASGQKQSVGGQFRASLSALMTTLSATTPHYVRC
IKPNDTKTAFQFDEARAVNQLRACGVLETIRISSAGFPSRWLYQDFFQRYRLLCKQKEVD
RANIKKTCQRILEKYIKEPDKYQFGTTKIFFRAGQVAYLEKLRAEIQRAYCVRIQSCVRG
FLARRRYRTIMRAVRGVQARARGYLARLQAKEIRRERAAITIQKHVRGWLVRKRYRNLRN
LVIGLQARARGYLARKYCMEKRYLLAAITIQRYWRGYLARKRVKRMKRLIVVAQSAIRRW
VARREYKKLRIEARSIDHIRTLNKGLENKIISLQQKLEHSLDKNKIIEPLQAQISELREK
LDKLRLIEKEAKTLRITLGDKENFLMFIKEELEKERESIKLLTEEKKELERKYKKDREEL
EYDNEKLAKELKSTKEHYEMLFEERDKQFEAEKKALASELEAEKQSRQKLISTQHDLQEK
LDSMQRAQSSKEHRRSVSDVSNITQAETENTIEDDFGYGSVRSVETVRPALEAVNWSAGS
NNTPAPIADAGLVLRMQNRISTLQSELSRTTKRATDLEERLMNRLMLPASNPNSDRFKVE
ELEIENKKLREQLDRLRAAGDSIILSKEVVGQMEAMQQELDRRRDECVQLKSVLSHQKPW
FQTLKNTVTVNLKSLASANYGSDVDIINEDGELASAYEAQKGINRQLQEELTAEKKFYAE
HISKSKAEIDRLKEENEKYQKLLSADLSQQPMNKGQEYAQNEIIKLAAESLAIQERVDKL
SESCRRYKNQIRLLVEKLKEAGVEDVLDILEGNESVVSQNVSLPLQIAPVPRKKEREYLG
MFEYKIQDESTIIKKLITDLKPHIAVTLLPGLPAYILFMMLRHTDHVDDEPKMHSLIKSI
RAGVKKILKRKADSVEYQALWLANMLRLLNNLRQYSGDSVYQTSNTPRQNQQCLRIFDLS
EYRQLLSDIAIWIYQGVINLLERQVERLIVAAILDYEEISGLFGPNEAPAPSVASTGPAK
LKHELATTHEHLKVHEVDVSLRVMIFKQLFYFICAYSLNQLLLRKDLCSWAKGLQIRFNI
SHLEIWIKENLIEYGQNSVDDVLSVLKPITQAVQLLQARKSMDDVTSTVDMCANLSVIQV
CKILNMYTPAEVYEVKVTKDFIHEVQKVMQERSGGQTNKAQENLLMDTKLIFAVQFHFNP
SPIRLEDIEVPEVFELDGLLTKI
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgaccactaaggagctctatactaagggtgcccaagtatgggtggagcatccagtgaag
gtttgggagagcgcgacagtcaccagcgacttcagatccggagtgctcatcgtgcagctc
gacacatcgaaggagatacgtcaaattaagatacaagatgcaagcagtttgccgccatta
cgaaatccctcgctcctaattggccagaacgatcttacgtcactctcttacctccatgaa
ccagcggtgctacataacctcaaagttagattctgcgatcgcaatgccatctacacgtat
tgcggtattgtgctggtcgccatcaacccttactccgagcttcctatttatggcgatgac
acaattatggcgtaccgtggccagtctatgggagacctcgatccccatatattcgctgtg
tcagaggaggcctacactaagctggagagggaaagacgggatcaaagtatcatagtgagc
ggagaatcaggcgcgggcaaaactgtgtcggctaaatatgccatgaggtattttgccgct
gtgggtggcaatgccagtgaaacgcaggtggagaggaaagtgcttgcgtctagccctata
atggaggctatcggaaacgccaaaacaacacgtaacgacaactcgtctcgcttcggcaag
ttcatcgagatccacttcgataacgagtaccggatatccggtgccagtatgagaacatac
ctgctggagaagtctcgagtggtctaccagagcagtggagagaggaactaccatatattc
tatcagctttgcgcagctgctgaagatatgccggatttgaaacttgatcaccaagactca
tttcatttcttaaatcaaggtggaagtccagaaattgatggagttgacgattacaaagca
tttatggataccaagaatgctttgacaactttaggtgtgacagagtcggagcaacagaat
atgttcactgtacttgcagctattttgcatttgggtaacgttgtatttacaagtgacccc
gacatcgctgatcctaataaccaagatggcgcctatatacaatccaatgatatgcatcta
agcacagcgtgttctctgctgggcgtgtccaagccggagttgtcacggtggctgacccac
cggcggatcgtgtcggctcatgaagtgattctgtcacgtatggacgtgtcccgcgctctg
ttcgcgagggacgcgctcgtcaagcgaatgtatggagaggtgttcgcttggcttgtatcg
gtcgtcaacagggcgctcaatactggcaatgcgaaaaaacatttcataggagtcctcgac
atctacggtttcgagacctttgagataaattctttcgagcagttctgtatcaactacgcg
aacgagaagcttcagcaacagttcaatttgcacgtgttcaagttggagcaggacgaatat
ataaaggaggagataagttggaagatgatagatttctacgacaaccagccgtgcatagac
ctaatagaagaccgtcttggcatcctagctttgcttgatgaagaatgccgcgtgccacaa
ggatccgacatgggcttcgtcgggaagcttcaagataaatgttcaaagtacccgcatttc
ttgaagccgaggtttggaaacgctgcgtttattataaaacatttcgcggacaaagtggag
taccaatgcggcggtttcttggagaagaaccgcgataccgtgctagaagaacagttggag
tgcatcaaaacttctacatcatgtcggcttatacacaccatgttcgctgaggcggcagac
tactctgctactctgcccgctccaagaagaagaaccaccccctccatacccttggctagt
caaacgcaagtacctcgtcgagcttcgggccaaaagcagagcgtcggcggtcagttccgc
gcatctctgtcggcgctgatgacaacattgtccgcgaccacgcctcactatgtccgctgt
atcaagccaaacgacaccaagactgcgttccagttcgacgaggccagggctgttaatcag
ttgagagcgtgtggtgttctggagacaataagaatttcatctgccggctttccctcaaga
tggctttatcaagatttctttcaaaggtatcgcctactgtgtaaacagaaggaagtagac
agagcaaatatcaagaagacatgccaacgaatactggaaaaatacataaaggaacccgat
aagtatcagtttggtactaccaagatattcttcagggcaggtcaggttgcgtatttggag
aagctgcgggcagagatacaacgtgcgtactgcgtgcgtatacagagctgcgtgcgcggg
tttctggcgcggcgccgctaccgcactataatgcgggccgtgcgaggcgtacaggcccgt
gcgaggggctatctcgcacgattgcaagcaaaagaaatccgccgcgagcgtgccgccatt
acgatacagaagcacgtacgcggctggctcgtacgcaagcggtaccgcaacctgcgcaac
ttggtcatcggactgcaagcgcgggccagaggatatttggccaggaagtattgcatggag
aagcgctatttattagcggcaatcacgatacaacgctactggcgcggatatcttgcgagg
aagcgtgtgaagcgaatgaagaggctcatagtggtcgcgcagagtgcaattcgtcgctgg
gttgcgcgtcgtgagtacaaaaaactacgaattgaggcccgcagtatcgatcatatacgg
accctgaacaaaggcttggaaaacaagatcatttcacttcagcagaaactggagcactct
ctggacaaaaacaagattatagaaccgttacaggcccagatatcggagctcagagaaaag
ctagataaactcagactcatcgaaaaggaggcgaaaactctacgaataactcttggagac
aaggaaaacttcttaatgtttatcaaagaagagcttgaaaaagagagagaatcaattaag
ttgctgacagaggagaaaaaagagttggagaggaagtataagaaggacagagaagaatta
gaatatgataatgagaaactggcgaaggagttgaagagtactaaggagcactatgaaatg
ctttttgaagaacgcgacaaacagttcgaagcggagaaaaaagccctcgcgtcggaactg
gaagctgagaagcaaagccgacagaaactcatctccacccaacatgatttgcaagagaaa
ttggattcgatgcaacgagctcaatcaagcaaagaacacagaaggtcggtatcggacgtg
agtaatataacgcaagcggaaacggaaaatactatcgaagatgatttcgggtatgggtca
gtacgttctgtggagacagtacggccggctctggaagctgtcaactggtccgctggcagt
aacaacacacccgcaccgatcgcagatgccggcctcgtactacgaatgcagaatagaata
tcaactctacagagcgaactttctagaacaacaaaacgtgcaacggacttggaggaaagg
ctgatgaatcgcctcatgctaccagcatccaatccgaactcggatcgctttaaagtagaa
gagttagagattgagaataagaagcttcgagaacagttggatagactgcgagcggctgga
gacagtattattttatctaaggaagttgttggtcaaatggaagcgatgcaacaggagcta
gacagaagacgagacgaatgtgttcagctgaagagtgttttgtcgcatcagaaaccgtgg
ttccaaacattgaagaatactgttacggtgaatcttaagtctctcgcatctgctaactac
ggatctgacgtggacatcatcaatgaagatggtgaactggcatcggcgtatgaagcacaa
aaaggaatcaatagacaactccaagaagaactaacagcggaaaagaagttctacgcagag
catatctccaaatcgaaggcagagatcgatcggctgaaggaagaaaatgaaaaataccag
aagttgctgagtgcagacttgagccagcaacccatgaacaaaggacaggaatacgcgcag
aatgaaattatcaaattggcggcggaaagtttggcaatacaggaaagagtcgataaactg
tcagagagctgtcgaaggtacaagaaccagattcgactgctggtggagaagctgaaggaa
gctggcgtggaagatgtcctagacattttagaaggaaatgagtcagtggtttctcaaaac
gtgtctctccctctacaaatagctccagtgccgcgcaagaaagagagagaatacctggga
atgttcgaatacaaaattcaagatgaatctactattattaagaaactgatcacggattta
aaaccacacatagcagtgacactacttccgggtttacctgcatacattctgttcatgatg
ctacgtcacacggaccacgttgacgatgagccaaagatgcactccttgattaagagcatc
agagcaggcgtgaagaagatattgaaaaggaaagctgatagcgtggaataccaggcgcta
tggctcgctaatatgttaaggctactgaacaatcttcggcaatacagcggcgactcagtg
tatcagaccagcaacacgccgcggcagaaccagcagtgtcttcggatcttcgacctctct
gaatatcggcagctgctaagtgacatcgctatatggatatatcaaggtgttataaaccta
ctcgagcgccaagtcgagcgtctaatagtggcagccatactagattacgaggagatcagc
ggtctgttcggacccaacgaggccccagcgccttccgtagcatcaacaggacctgccaaa
ctgaaacacgaactggcaacaacacatgaacacctcaaagttcacgaagtcgatgtgtcg
ctacgagttatgattttcaaacagctattctacttcatctgcgcgtacagtctgaaccaa
ctgctcctgcgcaaggatctgtgcagctgggctaaagggctccagataaggtttaacatt
tcccaccttgagatttggatcaaagagaacctcattgagtatggacagaacagcgtggac
gacgtattgagcgtgctcaagccaataacccaagccgtgcagttgttgcaagcccgtaag
tcgatggatgacgtcaccagcactgtggacatgtgcgccaatctgtctgtcatacaagtc
tgtaagatactgaatatgtatacgccggcggaggtatacgaagtcaaggtgactaaggac
ttcatccatgaggtccagaaagtgatgcaggagagatctgggggtcaaactaacaaagca
caagaaaacctcctgatggatacaaagctgatatttgctgtacagttccattttaaccca
tctcctataaggctggaagatatcgaagtacccgaagtatttgaactagacggcttgctc
acaaaaatataa
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