Leptidea sinapis (Wood White): 126975190
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Entry
126975190 CDS
T09272
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsin03036
]
126975190
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lsin00535
]
126975190
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
126975190
Meiosis-specific proteins
Cohesin complex and associated proteins
126975190
Proteoglycans [BR:
lsin00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
126975190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
CCDC-167
RIC3
FtsK_SpoIIIE
DUF1702
Motif
Other DBs
NCBI-GeneID:
126975190
NCBI-ProteinID:
XP_050678909
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Position
35:complement(9964586..10038005)
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AA seq
1201 aa
AA seq
DB search
MHIKQVIIQGFKSYREQIVVEPFDKRHNVVVGRNGSGKSNFFHAIQFVLSDEFSHLRPEQ
RLGLLHEGTGPRVISAFVEIIFDNSDNRIPIEKDEIFLRRVIGSKKDQFFLNKKVVPRSE
VLNLLESAGLSNSNPYYIVKQGKINQMAIAPDSQRLKLLREVAGTRVYDERREESVTILK
ETVGKVEKINEYLQTIEERLKTLEEEKEELKEYQKWDKSRRVLEFIVHDTEHRENKRKLE
ELQKVRANSGKEQQQYADLVREAQEHVRESNKKLKDARKDVGAAKEEKDILSTELQQLLR
EKTKLELGIKDLTDDVDGDNKSKERAEAELERLRQQISEKERELEELKPKYEEMKAREEE
CTRALALNQQKRQELYAKQGRGTQFTSKQDRDKWIEKELKSLNKQIKDKKDHETKLRDDL
RRDATKLTELEKRIEELTKEMERQRVAIDEHNKQYYECKKRKDQEQCTRNELWRKETTLT
QNLSSLKEDLAKADQALRSMAGKPILNGRDSVRKVLETFQERGGEWAKIADQYFGPVIEN
FTCDKTIYTAVEVTAGNRLFHHIVESDTVGTKILKEMNRQNLPGEVTFMPLNRLQVRDMN
YPNDNNAIAMVHKLKYDPKYAKAMKYIFGKTLICRNLECATELGKQYHLDCVTLEGDQVS
SKGSLTGGYFNQSRSRLEMQKTRSELMEQITTLEEELNQLRQELNKTETSINSIVSEMQR
TETKQGKAKDIFDKVKADIRLMKEELSSIERFRGPKERSLAQCHSSLEAMQATKEGLESE
LHQELMEQLSTADQGKVDELNDAIRRLTQENKEAFSQRMNLEATKNKLENLLTNNLIRRK
DELVQALQEISVEDRKRRLQNSKSDLIAAEKRIKQINKDLEEVDKKVLAAVKNEKALKIE
LEKWRNKEKEVQDKMEEDTRDLEKLASKEVFLQEKIQESLDKIAALGTLPNAPELHTKYE
KMSLKQLFKELEKANQHLKKYNHVNKKALDQFISFSEQKEKLYKRKEELDIGGEKIRELI
EVLEHRKLEAIQFTFKQVSKNFTDVFKKLAPQGRGSLIMRVADELDVNPDRANAEQFCGV
GIRVSFTGGEGDMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKA
IANMIHELSSSAQFITTTFRPELLEHAHKFYGVKFRNKVSHVECVSQAEARDFVEDSATH
A
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgcatataaagcaggtaattattcaaggctttaaaagttaccgggagcaaatagtagtg
gaaccatttgataaacgtcataatgttgttgttggacgaaatggatctgggaaaagtaac
ttctttcatgctattcagtttgtgttaagtgatgaattctcacatctccgtccagaacag
aggctgggactgcttcatgagggtactggacccagagttatatccgcctttgttgagatt
atatttgacaattcagataacagaataccaattgagaaggatgaaattttcttgagacga
gttataggatcgaaaaaagatcaatttttcttgaacaaaaaggttgtaccacgctcagag
gtactgaacctactggaaagtgcaggattatcaaattcaaatccgtattatattgtgaaa
caaggaaagatcaaccaaatggcaattgctccagactctcagagacttaaactattgaga
gaagttgctggtacaagagtttatgatgaaagacgggaagagtctgtgactattctaaag
gaaactgttggaaaggttgagaaaataaatgaatacctgcaaacaattgaagaaagacta
aagacgctggaagaagaaaaagaggagttgaaagaataccaaaaatgggacaaatctcga
cgtgttttggagttcattgtacatgacacagaacatcgggagaataagagaaaactggaa
gaattgcaaaaggttcgtgcaaacagtggtaaggaacaacagcagtatgcagaccttgtg
agggaagcccaggaacatgtgcgggagtctaacaaaaaattgaaagatgcgaggaaagat
gtgggggcagccaaggaagaaaaagacatattgtcaacggagcttcaacaactgttgagg
gagaaaactaaactggagttgggtatcaaagatctcactgacgatgttgatggtgacaac
aaatccaaggaaagagctgaagccgagttagagcggttaagacaacaaatatcagaaaaa
gagagagagctagaagagttgaagccaaaatacgaagaaatgaaagcaagagaggaggaa
tgtactcgagccctggcattgaaccagcagaagcgacaggagctgtatgctaagcagggc
cggggcacgcagttcacatccaaacaggacagggacaagtggattgagaaggaacttaaa
tcattgaacaaacagataaaagacaagaaggaccatgagactaagcttcgcgatgacttg
cggcgtgatgctaccaaactaacagagttggagaagcgaatagaggagctcacaaaggag
atggaacggcagagagtggccattgacgagcacaacaagcagtactacgagtgcaagaag
agaaaggatcaggagcagtgcaccagaaatgagctgtggcgtaaagagactactcttaca
caaaacctgtcttcgcttaaagaagacctagcaaaggctgatcaagcactaagatctatg
gcaggaaagcccattctgaacggtcgggacagtgttcgcaaggtgttggaaacattccaa
gaacgtggaggagagtgggccaaaatcgccgatcagtacttcgggcccgtcatagagaac
tttacctgtgacaagactatatacactgcagtcgaggtgacggcaggcaacagattgttc
caccacatagtggagtcagacactgttgggacaaagattctaaaggagatgaaccgacag
aatctccccggggaagttaccttcatgccgcttaacaggctgcaagtacgggacatgaac
tacccgaatgacaataatgctattgctatggtgcataagctgaaatacgatccaaagtac
gcgaaagcgatgaagtacatcttcggcaagaccctgatatgccggaacttggaatgcgct
accgagctgggcaagcagtatcatctagattgcgtgacgttggagggtgaccaggtttcg
tccaagggttctctaactggtggttacttcaaccaatcgcggtctcgtctggagatgcag
aagaccaggtcggagctgatggagcaaattaccacgctcgaggaggagctcaaccagcta
cgacaagagttgaacaagactgagaccagcatcaactctattgtctctgagatgcagaga
actgaaacaaagcagggtaaagccaaggacatcttcgacaaggtgaaggcagacatccgc
ctgatgaaggaagagttatcttctatagaacgtttccgcggccccaaggagcgctcccta
gcgcagtgtcactccagtctggaagctatgcaagccacgaaggagggactcgaatctgaa
ctacatcaggagctaatggagcaactatcgaccgcggaccaagggaaggtcgacgagctt
aacgacgctatacggcgcctcacgcaggagaacaaggaggccttcagccagagaatgaac
ctcgaagccaccaagaataagctggagaacttgctcaccaacaacttgatacgccgtaaa
gacgaactggtccaagcgctgcaagagatatcggtggaggatcgcaagcgacggctacag
aacagcaagtcggacctgatcgcggcggagaagcgcatcaagcagatcaacaaggacctg
gaggaggtcgacaagaaggtgctggcggccgtcaagaacgagaaggcactcaagattgag
ctggagaagtggagaaacaaggaaaaagaagtgcaagataaaatggaagaagacacaaga
gacctcgagaagttggcttccaaggaagtgtttcttcaggagaaaattcaagagtccctg
gataagatagctgccctgggcacactccccaacgcgcccgagctgcacaccaaatatgag
aaaatgtcgctcaagcagttattcaaagaactggagaaggcgaatcaacacctgaagaag
tataaccatgtcaacaagaaagccctggatcagtttatcagcttctccgagcagaaggag
aaattgtacaagagaaaagaggagttggatattggcggcgagaaaatccgtgagctgata
gaggtgctcgagcaccgcaagctggaggccattcagttcacgttcaagcaggtcagcaag
aacttcacggacgtgttcaagaagctggcgccgcagggccgcgggtctctcatcatgcga
gtggcagacgaactggatgtcaaccccgaccgagcgaacgcggagcagttctgcggcgtg
ggcatccgggtgtcgttcacgggcggcgagggagacatgcgagagatgaaccagctctcg
ggcggacagaagtcgctggtcgcgctcgctctcatcttcgcgatccagaagtgcgacccc
gcgcccttctacctcttcgacgagatcgaccaggcgctagacgcgcagcaccgcaaggcg
atcgctaacatgatccacgagctgtcgagcagcgcgcagttcatcacgaccacgttccgg
cccgagctgctggagcacgcgcacaagttctacggagtcaagttccgcaacaaagtgtcg
cacgtggagtgtgtctcgcaggcggaggcgagggacttcgtggaggacagcgctacgcac
gcataa
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