KEGG   Leptidea sinapis (Wood White): 126975221
Entry
126975221         CDS       T09272                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03030  DNA replication
lsin03410  Base excision repair
lsin03420  Nucleotide excision repair
lsin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126975221
   03410 Base excision repair
    126975221
   03420 Nucleotide excision repair
    126975221
   03430 Mismatch repair
    126975221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsin03032]
    126975221
   03036 Chromosome and associated proteins [BR:lsin03036]
    126975221
   03400 DNA repair and recombination proteins [BR:lsin03400]
    126975221
DNA replication proteins [BR:lsin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126975221
  DNA Replication Termination Factors
   ELG1-RFC complex
    126975221
Chromosome and associated proteins [BR:lsin03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126975221
DNA repair and recombination proteins [BR:lsin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126975221
  Check point factors
   HRAD17(Rad24)-RFC complex
    126975221
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_lid_RFC1 AAA_11 AAA_22 Rep_fac_C AAA_16 AAA_19 Sigma54_activ_2 T4SS-DNA_transf AAA_33 SapB_1
Other DBs
NCBI-GeneID: 126975221
NCBI-ProteinID: XP_050678969
LinkDB
Position
35:complement(6479882..6481258)
AA seq 355 aa
MSLWVDRHRPKDLMKLDYHKDQAVRLKSLVQQGDFPHLLVYGPSGAGKKTRIMCLLRELY
GSGVERLRQETMHFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQ
IDSSGQREFKVIILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL
TIRVPAPTENEIANVLHNVCKKEGLSLPSELGMQIAKCADRNLRRALLMCEACKVQQYPF
KSDQKIPEPDWQQFIRETASMILSEQSPKKLGEVRQKLYELIIHGVPPDMIFAGLLKELV
RNCDIAMKCQVASYAAMFEHRMRLGNKAIFHLEAFVAKFMSIYKKFVEESLGDVF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagcctttgggtggatagacatcggccaaaagatttgatgaaattggattatcacaaa
gaccaagctgttcgcctgaaaagtcttgttcaacaaggtgatttcccccatcttttggtc
tatggaccttcgggagctggcaaaaaaaccaggattatgtgcttgttgcgggaattatat
ggttcaggcgtggaacggttgcgtcaagaaacaatgcattttactacaccttctaacaag
aaaattgaaattatgactgttagcagtaattatcacattgaagtaaatccaactgatgtg
ggtatacatgatcgagttgtcatcatggaccttgtgaagaatgtcgcacaaacacaccaa
attgattcatcaggacaaagagaatttaaagttataattttaaatgaagtggatgatttg
acaaaagatgctcagcatgctttacgtagaactatggaaaaatatgtagcaacttgtcgt
ctcatactcatagcaaactctatatcacgtgttattccagcaattagatcaagatgtttg
acaatcagagtgcctgctcctacagaaaatgaaattgcaaatgttctgcacaatgtatgc
aaaaaagaaggcctaagtttgccatctgagttgggaatgcagattgcgaaatgtgctgac
cgaaatttacggagagctctcctaatgtgtgaagcatgtaaagttcaacagtatccattt
aaatcagaccagaaaattcctgaaccagattggcagcagtttataagagaaactgcttca
atgatactctcagaacagtcacctaagaaacttggagaggtgcgacaaaagctatatgaa
ttaattatacatggagtgccccctgacatgatttttgctggactgcttaaagaacttgta
aggaattgtgatatagctatgaaatgccaggtagcaagttatgcagctatgtttgagcat
agaatgagactgggtaataaagcaatattccatttagaagcctttgttgctaagtttatg
tctatatataagaagtttgtagaagagtccttaggagatgttttctaa

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