Leptidea sinapis (Wood White): 126975436
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Entry
126975436 CDS
T09272
Name
(RefSeq) DENN domain-containing protein Crag isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126975436
Membrane trafficking [BR:
lsin04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
126975436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
Motif
Other DBs
NCBI-GeneID:
126975436
NCBI-ProteinID:
XP_050679270
LinkDB
All DBs
Position
36:complement(8734614..8800250)
Genome browser
AA seq
1624 aa
AA seq
DB search
MDEKRVAEYFVVAGLPETPESLEDTDSGHLKGYNTVAPITDIGVVFPGLDEKVPNGYEMI
QLTPTGLPADLNHGSMRSAECFICIRRGRDKPPLVDIGVMYDGKERLMADAEMVLSSVGG
RLANVNNSTAKTFITYRRAHPSAPCNALVVVDICVIVANRGETAPHAFCMIHKNLNKGLM
GSNVFLCYKKSMNRPPLIAYKPEVLFRYPSVDRRSLVFPISVPLFCLPMGSTLELWPNTA
SAPKPVFSTFVLTVADATDKVYGSAVTFYEKYPHTSLTEQQQEALGWRPGITHTTHSFNV
NKSICLLSRWPFSDTFERWLTYILEMSWSKEPLSIPVERYITHLLEEVPFPEPRILLQLS
PTNPQDRVIVTRRDDQPLVRSGAGFRQLLLNLGPDNCILLLALAITEQKILIHSLRPDTL
TAVSEAVSSLLFPFKWQCPYIPLCPLGLAEVLHAPLPYLIGVDSRFFDLYEPPPDVTCVD
LDTNNITICESQSHISIKLLPKRQVKLLKQTLEQLHNNIGPASPAHYSNSSKYNGEPTTS
LDRDFQKRKKEQALELKIQDAFLRFMALTLHGYRSFLIPITKAPTVGTTDPQALFHMDAF
IKSRDKTQQRFFSLMMRTQMFTRFIEERSFVVDGADQGLTFFDECIERVLRDEPLLDIDT
SNTSERTVFVLPPDPPDPEEQYTYEKFVLDESLIARCKQWSRGGVQALPSAALASAESLA
DASPMARRTKHEIAAAQRLARKASLSPEAWAKCLLGACYSLYFLALPCRLMLFRGKEHAT
LRAAYELLERATKLRVPCDEVCYRVMMQLCGIHSLPVLAVQLLFLMKGAGLQPNALTYGY
YNRCVLEAAWPKDMPSGSQLLWNKLRIVVTGTALFRAAGAQRASRNAGNLTASSGGTLPR
VRSLAGEGSDLSALALAEPMRSRSSLDSVYREAETCSASASVFEALCRRGQLVRRTSSTH
ARAHTLSHHAGLLISGVPSDPDLSESTRPRSNSLSNEEPEKTAPMEKIQPIHVSPESPPD
MRILKRSESFAGDAQIVQNLQRLSFGNTASKYRCSRTLSFPEEVEYTQNGEREPAGTQLK
NNISTPLKLSPRTPVLADDPLGALKLADEPELVPQPEEPPPPKHELSVSPKLFHRRSNSF
DSEPHETTGKLHRSETAPATVSSSLATLGNTLKISFGRYSPSRLSLRRENMNIGKAMLEN
YFSPTSIAGKKSNELLQSGLSSLKSAATSVAKKIDEMKEVISANTTPVKMKGAVGSATSA
IASYYISENTSDTSEVNNEEGGSTGVRRSSSDAELTCAMERGSLATLLSHLPENLYPHQN
EARSGEKVSVRVLMSSCSQCPQCQAWLYDEDIMAGWAADDSNLNTRCTACGRHTVPLLSL
QITRTGQSQPEPVSVPYLNPLVLRKEFESILSREGDSCLAESEFVASHPIVYWNLVWFLG
RANIDNHLPDLLCPNYSSRYTSSDALSDADTVGVCRVQYMWDGIGDCNGGALYRSWLERR
HSKRSRQLSALLLNEDSPQQHSVILSIQEGLVNNNLSDAIRRLASWRESTTTNKRYPSLY
RDILFLAMTMFAEHINLSAIHREYSRAVEQFGSEIRPQDQPPSPTAVCCRHYFKRLSLNV
DQKL
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaagagttgctgagtattttgttgtggctggtcttccagaaacgccggaa
tctcttgaagatacagattctgggcatctgaaaggatacaatacagtagctcccataact
gacataggtgtagtgttccctggcctcgacgagaaggtgcccaatggctacgagatgata
cagctgacacctacaggtcttccagccgacctgaaccatggctccatgcgctctgcagaa
tgtttcatctgcatacgaagagggagagacaagccaccgcttgtggatattggtgtcatg
tacgacggcaaggagcgcctcatggcggacgcggagatggttctcagttccgtgggcggt
cggttggcgaacgtgaacaactcgaccgcgaagaccttcatcacgtaccggcgggcgcac
ccctcggcgccctgcaacgctctggtcgtggtggacatctgcgtgatcgtggccaaccgc
ggggagacggcgccgcatgccttctgtatgatccacaagaacctcaataaaggtttgatg
ggcagtaacgtgtttctgtgttacaaaaagtctatgaaccggccgccgttaattgcttac
aagccggaagttctgttcaggtacccttcagtagaccgccgcagtcttgtgtttccaata
tcggtgccgctattctgtctgcctatgggatctacgctggagctgtggcccaacacagcg
tctgcgccgaaaccggtcttctccacttttgtactcacagttgctgatgctactgataag
gtgtacggctcagcggtgactttctacgagaaatatcctcacacctcactaacggagcaa
cagcaagaggccctcggatggcggccaggcatcacccacaccacccattcgtttaacgtt
aacaaatccatctgtctcctatcacggtggcccttcagcgataccttcgagcggtggctc
acttatatattggaaatgtcatggagtaaagaaccactgagtatacccgttgagaggtat
attacgcatttgttagaggaggtgccatttcctgagccacggatattactgcagctatca
cccacgaaccctcaagaccgggttatagtgacgcgacgagacgaccagcccctagtgcgg
agcggcgccggtttccggcagttactgctgaacctgggacccgacaactgtatactgcta
ctggcgctcgctatcaccgaacagaaaatacttatacactcactcagaccagatacactg
acggctgtttcggaagcggtgtcgagtctactgttcccattcaaatggcagtgtccttat
ataccactgtgtccattaggcttagcggaagttttacacgcacctctcccttacctaata
ggcgtggattccagatttttcgatctgtacgaaccaccgccagacgtcacctgcgtagac
ctagacacaaataatattacaatttgtgaatctcaaagccatatatcgataaagttacta
ccgaaacggcaagtgaaattgcttaaacaaacgcttgaacaacttcacaacaacatagga
ccagcatcaccggcacattattcgaatagcagtaaatacaatggagaaccaaccacgagc
ctggatagggacttccagaaacggaaaaaggagcaagcgttggagctaaagattcaggat
gcttttcttcgatttatggcgttaacgttgcacggataccgctcttttctcattcccatc
actaaagcacccacagtgggaactacggatccgcaggcgttattccacatggatgccttc
attaaatctagggataagacgcagcaacggttcttctcgctgatgatgcgtactcaaatg
ttcacacgcttcatcgaggagcggtcgttcgtggtggacggcgcagaccaggggctcact
ttcttcgacgagtgcatcgagcgcgtactccgcgacgagccgctacttgatatagacacc
tccaacacatctgagcggaccgtgttcgttctgccaccggacccgcccgacccagaagag
cagtacacatacgagaagttcgtgttggacgagagtttgatcgctcgctgcaagcagtgg
tcgcgcggcggcgtgcaagcgttgccgagtgcggctctggcgtccgctgagtcgctcgct
gatgcgtcgccgatggctcgccggaccaaacacgagatagctgccgcgcagagattagcc
cggaaagcgagcctgtctcctgaagcgtgggccaaatgtcttctcggcgcttgttactca
ctttacttcttggctctgccgtgccgactcatgctgtttcggggaaaggaacacgcgacc
ctccgcgctgcctacgagctcctggaacgagccactaagctcagggtgccatgcgatgag
gtgtgctaccgcgtgatgatgcagctgtgtggcatccactccctgccggtgctggcagta
caactgctgttcctcatgaagggggcgggcttgcagcccaatgcgctcacatacgggtac
tacaaccgctgcgtcctcgaagcagcctggcctaaagacatgccaagcggatctcaactg
ttgtggaacaagctgcgtatagtggtgacgggtacggcgttgttccgagcagcgggagcg
cagagggcgagtcggaacgcggggaacctcactgcctccagtggcggcacgttgcctcgc
gtgcgttcgctggcgggcgagggttcggatttgtctgcgctcgcacttgcagaaccgatg
cgaagccgatctagtctagactcagtgtaccgcgaggcggagacgtgctcggcgtcggcg
agtgtgttcgaggcgctgtgccggcgcggccagctagtgcggcgcacgtcgtccacacat
gcgcgggcacacacgctgtcgcaccacgccggcctgctcatatccggtgtgccgtcagat
cctgatttaagcgaaagtacacgacccagaagtaattcattatccaacgaggaacctgaa
aagactgcccctatggaaaaaattcaacctattcatgtaagtccagagagcccgcccgac
atgaggatattaaagcgatccgagagttttgcgggtgacgcacaaattgtgcaaaactta
caacgactttcattcggtaacacagcgtcaaaataccgctgttcgagaacgcttagtttc
ccagaggaagtggagtacactcagaatggtgaaagggagccagctggcacgcaattgaaa
aataatatatcgacaccgctcaagttatcgcctcgcacgccggtcctggcggacgatccc
ctgggtgccctgaagctagcggacgagcccgagctggtgccccaacctgaagagcctcct
cctcccaaacacgagctcagtgtcagtcccaagctgttccaccgccgcagcaattccttc
gacagcgaaccgcacgagacaactgggaaactacatagaagtgagacagcgcccgcaacc
gtgtcctcgagtctggcgacactgggcaacacgttgaagattagctttggacgctattcg
cccagcagactgtctttgcgtagagagaacatgaacattggcaaggcgatgctcgagaat
tactttagtccaacaagtatagcgggtaagaaatccaacgagctcctacaaagcggactg
agcagtctgaagtcggccgccaccagtgtcgccaagaagattgacgaaatgaaggaggtg
atatcagcgaacaccaccccggtgaagatgaagggtgcggtggggagtgcgactagcgcc
atcgccagctactacatctctgagaacacatcggacacttcggaagttaacaatgaagag
ggcggcagtacgggcgtgagacgttcttcgagcgacgcggagctcacgtgcgccatggag
cgaggctcgctggccacgctgctgtcacacctgcctgagaacctctatccacaccagaac
gaggcgaggagcggagagaaggtgagtgtgcgtgtcctgatgtcgtcgtgctcgcagtgc
cctcagtgccaggcctggctctacgacgaggatatcatggcgggttgggcggccgacgac
tccaatctcaacacgcggtgcaccgcctgcggccgacacaccgtgccgctgctctcgctg
cagataacgcgaacgggtcagtcgcagccggagccagtgagtgtgccgtatctgaatcca
ttggtgctgcggaaagaattcgaatctattttaagtagagaaggcgattcgtgtctagcg
gagtccgagttcgtagcatcgcacccgatcgtatactggaacctggtgtggttcctcggg
cgtgccaacatcgacaaccacctgccagatctgctctgccccaactactcctcgagatat
accagctccgatgcgctatcagacgcggatactgtcggagtgtgtcgtgttcagtacatg
tgggacggcataggagattgcaacggcggcgccctctaccgctcgtggctggagcgacgg
catagcaagcgctcgcggcagctgagtgccttgctcctgaacgaggactcgccgcaacaa
cactctgtgatactttcaatacaagagggcttggtgaacaataatctctcggacgctatt
cggaggttagcttcgtggcgggagtcaactacgacaaataagagatatccatcactgtac
agagacatattgttcctcgctatgacgatgttcgccgagcacatcaacttgtcggcgatc
caccgcgagtactcgcgcgccgtcgaacagttcggcagcgagatccggccccaggaccag
ccaccgtcgcccaccgccgtgtgttgccgccactacttcaaacgtctctcgctcaacgtg
gaccagaagctctag
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