Leptidea sinapis (Wood White): 126975737
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Entry
126975737 CDS
T09272
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03440
Homologous recombination
lsin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126975737
03460 Fanconi anemia pathway
126975737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126975737
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126975737
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
126975737
FA (Fanconi anemia) pathway
Downstream FA components
126975737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Baculo_8kDa
Motif
Other DBs
NCBI-GeneID:
126975737
NCBI-ProteinID:
XP_050679703
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All DBs
Position
37:complement(5137501..5253097)
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AA seq
940 aa
AA seq
DB search
MESIEISDDDESFEEPVNSKQKAVAYEISSDEELPNVEIRSKRQTYIHNLFPKTATISSR
TNETSRKPGQTPNVNPIPDKCGSGIEKMIGGVKVILPVNPYGSQLALMSIVIKAIKNNQN
CLLESPTGSGKTLALLCATLAWQMQERKRLNEKLTQSYFNDHPELNNLLEGHDSYKTMTA
DERGDFFNKFAYSKKTIYSDPDEGGDTTAVCGSSKRQEPLNDSGEGSPTKGLVTIHKRRR
LYSSEVEDSKAKSGEPPSTPDKKIQVSEPTTPEEVRNLYSLVENLGVRTSMLVACSLPII
YYGARTHKQIQQVVREFSRTEYCGKALMTVLSSREYSCIREFDRKQWATKNDMCRGCVQG
TDRERNRESTNCAYYNNRKALNHKALPHAFDLEELVRVGEEIRACPYYAAREMANAAHIV
FCPYNYLIEPGIRSSMQIDVSGNIVIIDEGHNIEDVCRDAATFTVTKAQLDAAILELQKV
AQFTYANQDSMGYIEHLLKVLNSWEQWFVNQKPLLSKAAVNNGEAVYTWAVEHFTTTLHN
HNIGQKQYAEFRHHAELFCRRLREDPRTLFGVTQATGSLVETIDTVLGYLFRHDGKYMDD
FVPVLVRHVVADEVSENFNWRNSQFDRSVEKESLSLRLLCMNPALVFEALSPARSILLAS
GTLTPLVSLHSELASSFPLQISPNHIIPKDRVWIGTLGSQPDRSRLECTSRACQEPATQD
ALGAAVLHVCRVTPSGVLCFLPSYGLMNTLVRRWRETNVWSKLEQLKHVFMESRNVRDHS
DIMEDYYKYSASEKGALLFAVYRGKVSEGMDFKDHQARAVIAIGVPYPNTYDMAVKEKMK
YNNRYTENRKLLPGNEWLRVQAYRALNQAVGRCVRHVRDWGGVLLVDARFQNPHYTEHLS
KWLANYLGNNHHTFDSLVNGPNNLETFMQNMKIRDEEEVM
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtattgaaatatccgatgatgacgaaagttttgaagaacctgtaaatagtaaa
caaaaagcagtggcctacgaaatttcttctgacgaagaattgccgaatgtagaaataaga
agtaaaaggcagacttatatacacaatttatttccaaaaactgctactataagttctaga
acaaatgaaacctcaagaaaaccagggcagactcctaatgtaaatcctattcctgataaa
tgtggcagtgggatcgagaaaatgataggaggtgttaaagttattctaccagtcaatcct
tatggcagtcagcttgctttaatgtctattgtaattaaggcaattaaaaataatcaaaat
tgcttgctcgagagtccgacgggatctggcaagactctggccctcttgtgtgctaccctg
gcatggcagatgcaagagagaaaacgtctgaacgagaagttgacccagagctatttcaat
gatcaccccgagctgaacaatctgctggaaggccacgactcgtacaagactatgacagct
gatgagagaggcgacttcttcaacaaatttgcttacagtaaaaaaacaatctacagtgat
ccagacgaaggaggcgacactactgctgtttgcggcagcagcaaacgtcaggagccactc
aacgacagcggtgaaggttctccgactaaaggcttggtcacaatccacaagagacgacgc
ctgtatagtagtgaggtggaagactcaaaagccaaaagtggtgaaccaccttcaacaccg
gataagaaaattcaagtatcggaaccgaccactcctgaagaagtcagaaacctttactct
ctcgtggagaatctcggtgttaggacgtcaatgttggttgcttgcagtcttcccatcatc
tactacggtgcgaggactcacaagcagatccaacaggtggtgagagagttctccaggacg
gagtactgcgggaaggccctcatgacggtgctgtcgagtcgagagtacagctgcatcagg
gagtttgataggaaacagtgggccaccaagaacgatatgtgcagaggatgtgttcagggg
acagaccgcgaaagaaacagggaatcaactaactgcgcgtactataacaaccgcaaggca
ctgaaccacaaagctctccctcacgccttcgacctggaagagttggtgcgcgtgggagag
gagataagggcgtgtccgtactacgccgcgcgcgagatggcgaacgcggctcacatcgtg
ttctgcccttacaactatttgatcgaaccgggcattagaagcagtatgcaaatcgatgtg
agcggcaacatagtgattatcgacgagggccacaacatcgaggacgtgtgccgcgacgct
gccaccttcactgtcaccaaagctcaactcgacgccgccatcttggagttgcagaaggta
gctcaatttacttacgcgaaccaggactccatgggatatattgaacacttgctgaaggtt
ctcaatagctgggagcagtggttcgtgaaccagaagccgctgctgagcaaggcggccgtc
aacaacggcgaggcggtgtacacgtgggccgtggaacacttcaccaccacgctccacaac
cacaacattggccagaaacagtatgccgagttccgacaccacgcggagttgttctgtcgt
cgactgcgggaagacccgcgcacgttgttcggcgtgacgcaggcgacgggctcgctcgta
gagaccatagacacggtgctaggctacctgttccggcatgacggcaaatacatggatgac
tttgtaccggtcctggtgcgtcatgtggtcgcggacgaagtgtccgagaacttcaactgg
aggaactctcagttcgaccggtcggtggagaaggaatccctgtcactccgccttctttgt
atgaaccccgcgctggtgttcgaggctctgtctcctgctcgcagtatcctgctggcctcc
gggactctcactcctctggtcagcctccactccgagctggcctcgtcgttccctctgcag
atcagcccgaaccatatcatacccaaagatagggtgtggataggcaccctgggcagccag
ccagaccgctccaggctggagtgcacgagccgggcgtgccaggagcccgccactcaggac
gcactgggcgccgccgtgctgcacgtgtgccgggtcactccctcgggggtgctgtgcttc
ctgccctcctacggcctcatgaacacactggtgcgccgttggagggaaactaatgtgtgg
agcaagttggagcaattgaagcacgtgtttatggagagtcgcaatgttcgagaccacagc
gatataatggaggactattacaaatattctgcgagtgagaagggcgcgctactgttcgcc
gtgtaccgcggcaaggtgtccgagggtatggacttcaaagatcaccaggcacgcgccgtc
attgcgatcggtgtcccgtacccaaacacttacgacatggccgtcaaagagaagatgaag
tacaacaacagatacacggagaacaggaaactgctgcccgggaatgaatggctcagggta
caggcttacagagcgttgaaccaggcggtggggcggtgtgtacgtcacgtgcgcgactgg
ggcggggtcctactggtggacgcccgcttccagaacccgcactacaccgagcacctgtcc
aagtggctcgctaactatttgggcaacaatcaccacacattcgacagcttggtcaatggt
ccgaacaacttggagacctttatgcagaacatgaagatacgagatgaggaggaggtgatg
taa
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