KEGG   Leptidea sinapis (Wood White): 126975973
Entry
126975973         CDS       T09272                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03030  DNA replication
lsin03410  Base excision repair
lsin03420  Nucleotide excision repair
lsin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126975973
   03410 Base excision repair
    126975973
   03420 Nucleotide excision repair
    126975973
   03430 Mismatch repair
    126975973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsin03032]
    126975973
   03036 Chromosome and associated proteins [BR:lsin03036]
    126975973
   03400 DNA repair and recombination proteins [BR:lsin03400]
    126975973
DNA replication proteins [BR:lsin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126975973
  DNA Replication Termination Factors
   ELG1-RFC complex
    126975973
Chromosome and associated proteins [BR:lsin03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126975973
DNA repair and recombination proteins [BR:lsin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126975973
  Check point factors
   HRAD17(Rad24)-RFC complex
    126975973
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_14 AAA_22 AAA_assoc_2 AAA_11 RuvB_N AAA_16 DUF815 AAA_5 AAA_7 ResIII DEAD AAA_30 PhoH Sigma54_activ_2 Gp44_lid AAA_19 Mg_chelatase bpMoxR AAA_24 DUF4470 TFIIE_alpha AAA_3 T2SSE ATPase_2
Other DBs
NCBI-GeneID: 126975973
NCBI-ProteinID: XP_050680064
LinkDB
Position
38:complement(7066795..7084864)
AA seq 334 aa
MTVGEGTVNLPWVEKYRPSKLEDLVSHDDIIKTISQFMNQNQLPHLLFYGPPGTGKTSTI
LACAKQLYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLQQNQIVPRLQEII
DKENVKVSDDGIKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRSDINSI
LNWLLNEHDFATIFKNIQDLKILKGLALGDILTEIHTIIQRLKLPPEVLISLLIKMAESE
VRLSSGCSERIELAALIAAFQEARENVNIEELVA
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgacggttggtgaaggcacagtaaatttaccatgggtagaaaaatatagaccgtcaaaa
ttagaagacctcgtctcccatgacgatattattaaaacaattagtcaatttatgaatcaa
aatcagctccctcacttacttttctatggaccaccaggaactggcaagacttccacaata
ttggcatgtgctaaacagttgtatacacctcaacagttcaattctatggtgttagagctg
aatgcatctgatgatagaggtataggcattgtcagaggacaaatactgagttttgcatcc
acaaggaccatatttaaagctggaccaaaattgatcatccttgatgaagctgacgcaatg
accaatgatgcccagaatgctttgagaagaataatcgaaaagtacacggagaatgtgagg
ttttgtataatctgcaattaccttggcaagatcataccagcgcttcagtcgcgctgcact
cgcttcagattcgcgccgctgcagcagaaccagatagtgccgcgattacaggagatcatt
gataaggagaatgtaaaggtatcggatgacggtataaaagccttgctaacgctctctggc
ggtgacatgcgcaaagtgctgaacacgctacagagcacgtggctcgcctaccgtgacgtc
acagaggacaatgtgtacacgtgtgttggtcacccgctgcgctccgacatcaacagtata
ctcaattggctgctcaatgaacacgactttgcgactatctttaagaatatacaggattta
aaaatcttaaaaggattggcgcttggtgacattctcacagaaatacatactattattcaa
agattgaagctacccccggaagttttgatatcgttgctaataaagatggcggaaagtgaa
gtgcgcctgtctagcggttgtagcgagcggatagagctggcagcactcatcgcagcattt
caagaagcgcgggaaaatgttaatatagaagagctggttgcgtga

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