Leptidea sinapis (Wood White): 126976168
Help
Entry
126976168 CDS
T09272
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsin03041
]
126976168
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126976168
Spliceosome [BR:
lsin03041
]
Complex C
Other components
Complex C specific factors
126976168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_14
AAA_7
DUF7654
AAA
ResIII
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126976168
NCBI-ProteinID:
XP_050680356
LinkDB
All DBs
Position
39:4628021..4709012
Genome browser
AA seq
721 aa
AA seq
DB search
MFGRKPLFQKPGDDSLYPVKRKDGTIETLVNPNIDSALSIDNDSKTSVVYNRYHHLPLQT
QRQKLPVFQYRNHILYLLENYQTLILIGETGCGKSTQVPQYLRDVGHRVCVTQPRVVAAV
SLANRVAEEAGVVLGQDVGYAAAMTAQRTPETGIVFMTEGVLLREMFASPLLMQYSCIII
DEVHERSQMTDVVMGLLKKIAKKRKNLKIIVSSATMNADFLKDFFNIKESGGKDTSVVLS
MQGRTHPIDVFYVEEPVADYVKATVDTVIKIHENQPFGDILAFLTSSEEITSALETLRVY
ADENNERNAHRNTFPSGVASANMSVLPLYGSLPLYAQIKAFQTAERNVRKVILSTNIAET
SVTIPGVVYVIDCGFHKLPYFSPELGVECLTVSPVSKHNAIQRAARAARTNRGYCYRLYT
EAEYDKLPESVPPEMCRTDLTSVLLLLKALGIHNVLRFTFPSPPPAKSTLAALETLYALR
AVDKEAGLTDDGHKMAELPLRPMLAKMVCNSGEYGCIDEMLSIVSMLQVDTVFNKQTTGK
LNVAAKLSRRNNFEVSEGDIIMYLNILEAYIKLRGSQQSEQAARKASKAWCQKYYINYKV
MEKACEIRRSLEKLVKEKFNMENAKFDAPEFGSVKCERIMRCVVSGLFPQAASLGIEGHY
RGVRGAELHISPDSCLYHQQQPQWLVFGSVQSSGDKVYMRDIMRIDKQWLMQTAPHYYHE
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaagaaaacctctcttccaaaagccaggtgatgactcactatatccggtaaaa
agaaaagatggaactatagagaccttggttaatccaaacatagactctgccttatccata
gacaatgattctaaaaccagtgttgtgtacaaccgataccaccatctgccgttacaaaca
caacgccagaagcttccggtatttcagtacaggaaccacatattgtatttgctggagaac
tatcaaactctgattttgattggcgagacaggttgcgggaagtctactcaggtgcctcag
tatctacgcgatgtcggtcaccgggtatgtgttactcagccgagggtggtggcagctgtc
tcgctggcgaatcgcgtggctgaggaagcaggcgtggtgctgggacaggatgtgggctac
gcagccgccatgacagcgcagagaacgccagaaactggaattgtgtttatgactgaaggt
gtgctgcttcgagaaatgtttgcgtcacctctacttatgcagtactcctgcatcattata
gacgaggttcacgaaagatcgcaaatgaccgatgttgtgatgggactgctgaagaagatt
gcaaaaaaaaggaaaaacttgaaaataatagtttcgtcggcgactatgaacgccgatttc
ctgaaggatttctttaacataaaggaaagcggcgggaaagatacttcggttgttttatcg
atgcaaggaagaacgcatcccatcgacgtattctatgttgaagaaccagttgcggactat
gtaaaggcgacggtcgacacggtcatcaaaatacacgaaaaccagccgttcggtgatata
ctggcgtttctgacatcgtccgaagaaataacatcagcattagaaactcttcgcgtgtac
gcagacgagaacaacgaacggaatgcccaccgcaatacgttcccgtctggtgtcgcctcc
gcaaacatgtctgtgctgcccctgtacgggagcctgccgctgtacgcgcagataaaggcg
ttccagacagccgagcggaacgtccgcaaggtgatactgtccacaaatatcgcagagacc
agtgttaccatacctggagttgtttatgtgatagactgcggcttccataagctaccgtac
ttctctccggagctgggtgtcgagtgcctgaccgtgtccccggtgtccaagcacaacgcc
atacagcgagccgcgcgagcagcccggacaaatcgcggctactgttacagactgtataca
gaagccgaatacgataaacttccagaatctgttccgccggagatgtgccgaactgacctg
accagcgtactgttgctactcaaagctctcgggatacacaacgtgctgaggtttacgttc
ccaagtccaccgccagccaagagtactctggcggcactggaaacattgtacgcattgcgc
gccgttgacaaggaggcggggcttaccgacgacgggcacaagatggcggaactgccgctc
agacccatgttggcaaagatggtctgcaacagtggtgaatatgggtgtatagatgagatg
ctcagtatagtgtcaatgctgcaggtagacaccgtgttcaacaaacagacaaccggaaaa
ctcaatgtggccgctaaactgtcccggaggaacaattttgaggtgtcggagggggatata
ataatgtatctaaacatactagaggcgtacatcaagttaagggggtcacaacagagcgag
caggcggctcgtaaagcgagcaaagcctggtgtcagaagtattacatcaattataaggtc
atggagaaggcttgcgagattcgaagaagcttagaaaagttggttaaagaaaaattcaat
atggagaacgctaagttcgatgctccggaatttggttcagtgaaatgcgaacgtataatg
cggtgcgtggtttctgggttattcccgcaggcggcgtcgctgggcatcgaaggtcactac
cgtggcgtgcgaggtgccgagctccatatatctccagatagctgcctctaccaccagcaa
caaccacagtggctagtgtttggcagcgtgcagagctccggagataaggtgtacatgcgg
gacatcatgcggatagacaaacagtggctcatgcaaaccgctccgcattactatcacgag
acatag
DBGET
integrated database retrieval system
