Leptidea sinapis (Wood White): 126977105
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Entry
126977105 CDS
T09272
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03013
Nucleocytoplasmic transport
lsin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126977105
03015 mRNA surveillance pathway
126977105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126977105
03041 Spliceosome [BR:
lsin03041
]
126977105
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126977105
Spliceosome [BR:
lsin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
126977105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
126977105
NCBI-ProteinID:
XP_050681755
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Position
43:2748110..2773147
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AA seq
932 aa
AA seq
DB search
MMMYTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDIIKPWITQKITEILKM
EDDVVIDYVNNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASESGIPDT
FTQQKKEEIKKRMEEQKDKEKDRDRRRSSRSRSRSRRSRDRERRRSRTRSRDRSADRKYR
GSSSSRRSRRRSRDKSPPKSTHIEEIKLPEPKENGKSPRQETNEVSDVKEEEETVQNHTN
DSVKEELNDSGEKAVESNGKKSRSASPAKSVEGKEDGEKTVEKKQRSSSERRSSSRSSHG
SIKKPTSLKKRHYRSNRDSSTSVSPRRSSRRERSKSRQRSSRRRSVDRRDRERDRERERE
RERERERERRRRERERRDRSRERRRSLEKRRRSRSRSRRRSNDRSRERRRSRSRRRSRSV
RRSGRRSRDRRSRDRKSRDRDRRSRDRSRDRRSKDRTKDRKSRDRKSRDRRSSDLIKERL
EKSVSIPRKENLEKPRVKSVERVSLPRDEPKVQVSSSSRESSVEKKDKSDSKDKTRSKSI
HSSDEDDFVAIPVIREYSKSLSRTPSPFLRRRVAKKSDRSADEASEKEQAEEKREERVEE
VKKTKRKPKQSESESESSEEPPKSKKNKLKRKEKATSKRSKKAKKETSSSDSESDDSSSS
ESEDDRKKKNKKNSKKKLAKKSRKKRARSSSSESSSEEEVKHKSSKSKQKNIPDESDGDK
KSKKRKDPSVDRLKTDKVDSKQAKAKKTDHSDDSNDESSESDEKSKKKTKRDSSSDKDVR
RKKSESSKTGSPELHKAKKDDKTKGKQSEETKAKSRDDVERKGKKREKDESSSDSDQVSK
KKAKKKVSDSDSDSESDEPKKSKKAKKHKKHSKKHKKHKKHKKSSKKKDESSESEEAEEE
EENKVNNEDLEKKLRERALKSMKKQNSASGSE
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtatacggggactagtacagaacaggacacacgcttcagtgacaaggagaag
aagttgatgaagcaaatgaagtttggtgactgcttgacgcaacaggtggacatgtcgaag
gtgaagctggacatcattaagccgtggataactcagaagatcacggagatcctcaagatg
gaagacgacgtcgtcatcgactacgtcaacaaccaactcgaggaaaagttcccttgcccc
aaaaagatgcagatcaatttgacgggtttcctgaacggcaagaacgcgcggctgttcatg
ggagaactgtgggagctgctgctgagtgcgcaggccagcgagagtgggataccggacaca
tttactcaacagaagaaagaggaaataaagaagaggatggaggagcagaaagataaggag
aaggacagagaccggcgccgcagctcgcgctccaggagtcgctccagacgctcgcgggac
agggagcggcgccgctccaggacacgctccagggaccggtcagcggacaggaaatatcgc
ggaagcagctcatctcgtagatctcgtcgtagaagtcgggacaagagtccacctaaatcc
acccacattgaggaaattaaactaccagaacctaaagagaatggcaagtcaccacggcaa
gagacgaatgaagtatcggatgtgaaggaggaggaagaaaccgtacagaatcatactaat
gattccgtgaaagaagaactaaatgacagtggggagaaagctgttgagagcaatggaaaa
aagtcaagatcggcgtcgcctgctaagtctgttgagggtaaggaagatggtgagaagaca
gtggaaaagaagcaaaggtcttcaagtgaacggcggtcgtcgtctcgctcgtcgcatggc
agtatcaagaaaccgacttcgctcaagaagcgccactaccgctccaacagggactcctct
accagcgtcagtcctcgacgtagctctcgaagagagagaagcaagtcgcggcaacgtagc
agtcgacgtcggtcagtggaccggcgagacagagagcgagatagagaacgggaacgagag
cgggagagggagagggaaagagagcggaggcggcgcgagcgggagaggagagacaggtcc
cgcgagcgtcggcgatcgctggagaaacgtagacgttcccgatcgcggtctcgacgccgt
tcaaacgacaggtctcgcgagcgtcgtcgttcgcggtctcgtagacgttcccgttcagtg
cggcgctcgggccgcaggtccagggacaggcgctcaagagacaggaagtctagagacagg
gacaggcgctctagagaccgctccagggacagacgttcaaaggaccgcaccaaggacaga
aagtcgagggacagaaagtcacgtgacagaagatccagtgatttgattaaggagcgactc
gagaaatctgtgtcgataccacgtaaagaaaacttggaaaaaccgcgagttaagtcggta
gaacgagtatctctgccgcgcgacgaacccaaggttcaagtatctagttcgagtcgggaa
tcttccgtagaaaaaaaagataaatccgattcaaaagataaaactaggagtaagtctatt
cattcatctgatgaagacgatttcgttgctataccagtaatacgggaatattccaagagc
ctttctcgcacaccatcgccgttcctgcgaaggcgcgtggccaagaaatcagaccgatcc
gctgatgaggcctctgaaaaagagcaagccgaagaaaagagagaagaaagagttgaagaa
gtgaagaaaacaaaacgtaaaccaaaacaatccgagtctgaaagtgagagcagcgaagag
ccgccgaaatctaaaaaaaataaactgaaaagaaaggagaaggctacttcgaaaaggtca
aaaaaagcaaagaaggaaacctcatcgagcgatagtgaatctgacgattcctcatctagt
gaatctgaagacgacagaaagaagaaaaataagaaaaattcgaagaagaagttggccaag
aaatcgaggaagaaacgtgctcggtcctcaagttctgaatctagttctgaagaggaggtc
aagcataagagttccaaatcgaaacaaaagaacattccagatgaatcagacggtgataaa
aaatctaaaaaacgtaaagacccaagtgttgatagattgaaaactgataaagtggattct
aagcaagctaaggctaaaaaaacagatcattctgatgattcgaatgatgaaagctctgaa
agtgatgaaaaatcaaagaagaaaactaaacgtgattcgtcttcagataaagatgtgagg
cgcaagaagtctgagtcttcaaagactggatctcccgagcttcataaagcaaaaaaagat
gataagacaaaaggtaagcaaagtgaagaaacaaaggccaaatcccgtgatgatgtcgaa
agaaaaggtaaaaaacgcgaaaaggacgaatcgtcctctgatagtgatcaggtgtctaag
aagaaagctaaaaagaaagtttctgattcagattctgattctgagagtgatgagcctaag
aagtccaaaaaagctaagaaacataagaaacattcgaaaaagcacaagaagcataagaaa
cataagaagtcgtctaaaaagaaggatgaatcgtctgaaagtgaggaagcagaagaagaa
gaagaaaataaagtcaataacgaggatttagaaaagaaacttcgagaaagggcacttaaa
tccatgaaaaaacaaaatagcgcatctggctcggagtaa
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