Leptidea sinapis (Wood White): 126977227
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Entry
126977227 CDS
T09272
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126977227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126977227
03009 Ribosome biogenesis [BR:
lsin03009
]
126977227
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126977227
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
126977227
Pre-60S particles
126977227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
IBN_N
HEAT_2
TPR_IPO5
TOR1L1_N
Cnd1
HEAT_EF3_N
Arm
MMS19_C
Vac14_Fab1_bd
HEAT_MROH2B_C
Adaptin_N
TPR_DNAAF5
HEAT_MROH2B_1st
PDS5
CEP104-like_TOG
DUF3689
Dopey_N
Motif
Other DBs
NCBI-GeneID:
126977227
NCBI-ProteinID:
XP_050681907
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All DBs
Position
44:complement(6393960..6433288)
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AA seq
904 aa
AA seq
DB search
MKMEWKPEEEGLRQILTLLKESQSPDTATQRAVQQKLEELNKYPDFNNYLIFVLTKLVSE
EEPTRSLSGLILKNNVKSHYNSFVPEVAEFIKRECLSAVGDPSPLIRATVGIIITTIASK
GELTAWPELLPSLCQMLDSQDYNVCEGAFGALQKICEDTAEVLDSDALNRPLNVLIPKFL
QFFRHESPKIRCHAIACVNYFIMSRSQVLMLHIDSFIENLFHLAADDDTDVRKNVCHALV
LLLEVRLDRLIPHLPNIIEYMLVRTQDAEEGVALEACEFWLSLAEQNVCREVLGPRLPAL
LPVLVRGMRYSEMDVILLRGDRDDDADDAEPDRETDIRPRFHKPRSHTVKHTVMGSGDSN
MSGGGDSDDEDEGGDADDGTLSDWNLRKCSAAALDVLANVFGADLLPVLFPILKETLFHD
DWVIKESGILALGAVADGCMVGMVPHLPDLVPYLVCCLAERKALVRAITCWTLSRYSHWI
VAQSHDLYLRPVMTELLKRVLDNNKRVQEAACSAFATLEEEACTELVPYLGHILQTLVYA
FSRYQHKNLLILYDAIGTLADSVGHHLNKPEYINLLMPPLITKWNVLKDEDKDLFPLLEC
LSSVATALQSGFLPYCEPVFRRCVSLIEQTLNQNIANTQSPDQFEAPDKDFMIVALDLLS
GLTEGLDGHINHLVLNSNLMQLLYQCMQDPMPEVYPVRQSSFALLGDLTKACFQHVHPYI
SEFLPILGMNLNPELISVCNNATWAIGEISIKLGPETSKYIPLVLNHLVDIINRPSTPKT
LLENTAITIGRLGYVCPHDVAPVLHQFVRQWCTSLRNIRDNEEKDSAFRGICQMIQVNPG
GVVPDFMYFCDAVASWSHPKDDLKEMFTKILHGFKNQVGEENWRRFTDQFPAQLSARLTA
MCGI
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggagtggaaacccgaagaagaaggactaaggcaaattcttacgcttcttaaa
gagtcacagtctcctgatactgctactcaaagggctgttcaacaaaaattggaggaactg
aataaatatccagattttaacaactatctgatctttgttctaacgaagttggtctctgaa
gaagaacctacacgttctcttagtggcctaatcctgaagaacaatgtcaagtctcattac
aacagttttgtaccggaggtcgccgagttcataaagcgggaatgcttatcagcagttggt
gatccatcacctttgattcgtgccactgttggcataatcataacaacaattgccagtaag
ggtgaacttacagcatggcctgaattattaccatcattgtgtcaaatgcttgattcacag
gattacaatgtttgtgagggagcatttggtgctctacaaaaaatatgtgaagatacagca
gaagttctggatagtgatgcactcaataggcctttgaatgttttgattccgaaattcttg
cagttctttaggcatgaatcacctaaaattagatgtcatgcaatagcctgtgtgaattac
tttattatgagtagatcacaggtcctgatgttacatattgattcttttattgagaatcta
ttccatttggctgctgatgatgatacagatgttagaaaaaatgtctgccatgctttagtg
ttattattggaggttcgacttgacaggctgataccacatttgcctaatataattgagtat
atgttggtgaggacacaagatgcagaagaaggtgtcgctctagaagcatgcgaattttgg
ttatcattggccgaacagaatgtttgcagagaggtgctgggaccccgtttgccagctctg
ttgccagtattggtccgtggtatgagatactcggaaatggacgtgatactgctaaggggc
gacagagatgatgatgcagacgacgcagagccggacagggagactgatatacgacccaga
ttccacaaaccacgatcacatactgtgaaacacactgtgatgggcagcggtgacagcaac
atgtctggtggtggagactccgatgatgaggatgagggcggtgatgcagacgacggcact
ctgtcagactggaacctgcgcaagtgtagcgctgcagctctggacgtgctcgccaacgtg
ttcggcgctgacctgctgccggtgctgttccccatcctcaaggagacgctgttccacgac
gactgggtcattaaggagagtggtatactggcactgggtgccgtggcggatggatgcatg
gtcggcatggtaccgcatttgccagacctggtcccttacctggtgtgctgcctggccgaa
cggaaagctctggtacgagctatcacgtgctggaccctgtcgcgttattcgcactggatt
gtagcacagtcgcacgatctttacctaagacccgtaatgacagagctattgaaacgagta
ctggataacaacaaacgcgtccaagaggccgcttgctctgcgtttgcgactctagaagaa
gaagcttgcacagaactagtgccatacctcggtcacatcctgcaaacattagtgtatgcg
ttcagccgataccagcacaagaacctgctcatcctgtatgatgctataggaacacttgct
gactctgtggggcaccatttaaataagcctgaatatatcaatctattgatgccaccgctt
attaccaagtggaatgtgctgaaggatgaagataaggatctattcccgttgcttgaatgt
ctctcgtccgtggcaacagcactgcaatccggattcctgccgtactgtgagcctgtattc
agacgatgtgtctcactcatagaacagactctcaatcagaacattgccaacacacagagt
ccggaccagttcgaggcgcctgacaaggacttcatgatagtcgcgctcgacctgctgagc
ggcctgactgagggtctggacggccacatcaaccacctggtgctgaactccaacctgatg
cagctcctataccagtgcatgcaggaccccatgcccgaggtatatcctgttcggcagtca
tcgtttgccttgctgggtgatctaacgaaggcatgtttccaacacgtacacccatatata
tcggagtttttgcccatacttggtatgaacctgaatcctgaacttatatctgtctgcaat
aatgctacctgggcaatcggggagataagtattaagttaggtcctgaaacatcaaaatat
atcccattggttctaaaccatttggtggatattataaatagacccagcactccgaaaacc
ctattagaaaacaccgcgattacgatcggtcggctaggttatgtgtgcccacacgacgtc
gcacctgttttacatcaattcgttcgccagtggtgcacgtcgctacgcaacatccgcgac
aacgaggagaaggactccgcgttccgtgggatctgtcagatgatccaggtgaatccaggt
ggcgtggtgccagacttcatgtacttctgcgatgcggtcgcatcgtggtcacatcccaaa
gacgacctgaaggagatgtttacgaaaatactgcacgggtttaagaaccaggtgggcgag
gaaaactggcgccgattcactgaccagttccccgcgcagttgagcgcgagacttaccgcc
atgtgcgggatatag
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