Leptidea sinapis (Wood White): 126977384
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Entry
126977384 CDS
T09272
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03030
DNA replication
lsin03420
Nucleotide excision repair
lsin03430
Mismatch repair
lsin03440
Homologous recombination
lsin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126977384
03420 Nucleotide excision repair
126977384
03430 Mismatch repair
126977384
03440 Homologous recombination
126977384
03460 Fanconi anemia pathway
126977384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsin03000
]
126977384
03032 DNA replication proteins [BR:
lsin03032
]
126977384
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126977384
Transcription factors [BR:
lsin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126977384
DNA replication proteins [BR:
lsin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126977384
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126977384
MMR (mismatch excision repair)
126977384
DSBR (double strand breaks repair)
HR (homologous recombination)
126977384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PAS_8
Motif
Other DBs
NCBI-GeneID:
126977384
NCBI-ProteinID:
XP_050682105
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All DBs
Position
45:7851352..7865243
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AA seq
602 aa
AA seq
DB search
MSHKLSEGSLEVIMHGGLYDKPIMQVIGSKKIQGSGVNERFRLMVSDGKHTHTYAMLATQ
LNDKLISGELSDYSIVQIDRFVTSLVKNPGKAEKRVMIILDITIIVPGNQIGKTIGNPTS
WSEETAQAPPASTMQPEQKLKATPTTSAPRPANAPSLDSSLLSTQMTHPIISLSPYQNKW
VIKARVMSKSGIRTWSNAKGEGKLFSMDLCDDSGEIRATAFKNECDKFYDMIQVDKVYYI
SRCQLKTANKQFTSLKNDYEMTFTPDTVVAECMEDASCVPQVKYEFIPINEIADKGPDTL
LDVIGVCKMASDVQELTARSTGKLLKKREVTLVDATGAICLTLWGNSAETFDGNAHPVVA
AKGVRVTEFNGSKSLSCLASSMVRHNPDLPRAHQLRGWYDNGGADLDVVNISARAGAGGY
SGSGEWITFSEAEGRQLGSGNKGDYFTSLGVLTFTFADNAVYKACPQDQCNKKLLDQENG
LFRCEKCNREYPNYKYRLLLGAHVSDPSGDQRVTAFNEAAETILGRHAADIGRLFEYDKP
AYAQMFDDVKFNTYVFKFRTKMEVYNDEARLKTVVMSAQPVDYKDANSRLIKSIKALSGV
DV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaagttatccgaaggttctcttgaggtgataatgcatggagggctttatgac
aagcccattatgcaggttataggcagcaaaaagatacagggaagtggggttaatgaaagg
ttcagattaatggtgtctgacggtaaacatacccacacttatgcaatgctcgcaacacag
ctcaatgataaacttatatcaggagagttatcagattattcaattgttcaaattgaccgt
tttgttacttcactagtcaagaatccaggaaaagctgaaaagcgtgtaatgattatattg
gatataactattatagtccctggtaatcaaattggcaagaccattggtaaccctacaagc
tggtcagaagagacagctcaagctccaccagcaagtaccatgcagccagaacagaagcta
aaggctacacctacaacttctgctccaaggcctgctaatgctccttcccttgatagcagt
ctattaagcacacaaatgactcaccctattataagcttgagtccatatcaaaataaatgg
gtgataaaggctagagtgatgagcaagtctggaattcgcacttggagcaatgccaagggt
gaggggaagttgttcagtatggacctgtgtgatgacagcggagaaataagggctacagca
ttcaaaaatgaatgtgacaaattctatgatatgatacaggttgataaagtatattacata
agtagatgccagttgaagacagcaaacaaacagttcacaagtctcaaaaatgactatgag
atgacattcacaccggatactgtggttgccgaatgtatggaggatgcttcctgtgtgcct
caagttaaatacgagtttatacctattaatgaaatagctgacaaaggcccagatacactg
ttggatgtaattggtgtgtgcaaaatggctagtgatgttcaagaactaactgcaaggagt
actggtaaactgctgaaaaaacgggaagttacacttgttgatgcaacgggtgctatatgt
ctgacgctctggggaaactctgcggaaactttcgacggcaacgcccatcctgtagtcgct
gctaaaggagtcagagtgacggagttcaacggtagcaagagtctgtcgtgtctggccagc
tccatggtgcgtcacaaccctgacctgccgcgagcacatcagctgcggggctggtacgac
aatggcggcgcagacctggacgtcgtcaatatatccgccagagcgggcgccggcgggtac
tcgggcagcggtgaatggatcacgttctcggaggccgagggccgccagctgggctcgggc
aacaagggcgactacttcacctcgctgggcgtgctcaccttcaccttcgcagacaacgcc
gtgtacaaggcctgcccccaggaccagtgcaacaagaagctgctggaccaggagaacggc
ctgttccgctgcgagaagtgcaaccgcgagtatcccaactacaagtaccggctgctgctg
ggggcccacgtgtcggacccctcgggcgaccagcgcgtgacggccttcaacgaggcggcc
gagacgatcctcgggcgtcacgccgccgacatcggccgcctgttcgagtacgacaagccg
gcctacgcgcagatgttcgacgacgtcaagtttaacacctacgtgttcaagttccgcacc
aagatggaggtctacaacgacgaagcacgccttaagacagtagtgatgagcgcacaaccc
gtcgactataaggacgctaactcgaggctcattaaaagtattaaagctttaagtggtgtc
gatgtataa
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