Leptidea sinapis (Wood White): 126977543
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Entry
126977543 CDS
T09272
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03018
RNA degradation
lsin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126977543
09123 Folding, sorting and degradation
03018 RNA degradation
126977543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126977543
03041 Spliceosome [BR:
lsin03041
]
126977543
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126977543
mRNA degradation factors
5'-3' decay
Lsm complex
126977543
Spliceosome [BR:
lsin03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126977543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
126977543
NCBI-ProteinID:
XP_050682356
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Position
45:complement(1953894..1954713)
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AA seq
117 aa
AA seq
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MASKEAGEKNKGGQGGGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLL
NLVLDNTTEYLRDPDDPYKLLEDTRALGLVVCRGTSVVLICPMDGMEAIPNPFIAQE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaagaagcaggtgaaaaaaataagggaggtcaaggtggtggtgacaacaag
gaaaagcgaagaaaagagtctattctagatctcagcaagtatctagaaaaaagtataaga
gttaagtttgccgggggtcgtgaggcggcaggaattctaaaaggatacgatcccttgtta
aacttagttttagataatactacagaatatttaagagaccctgatgacccttataagtta
ttggaagataccagagcattaggtctagttgtgtgccgaggaacatcagtagtccttata
tgtccaatggatggaatggaagctatcccgaaccctttcattgcacaggaataa
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