Leptidea sinapis (Wood White): 126977732
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Entry
126977732 CDS
T09272
Name
(RefSeq) cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126977732
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126977732
Factors involved in mRNA localization
Other mRNA localization factors
126977732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
126977732
NCBI-ProteinID:
XP_050682371
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All DBs
Position
2:23292197..23337374
Genome browser
AA seq
1151 aa
AA seq
DB search
MSVSEKVSLSDALSNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFVTGIAK
YIEEATIHANLNELLEEGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPE
VDKLLQFMYFQRKAIERFCGEVRRLCHAEKRRDFVSEAYLLTLGKFVNMFAVLDELKNMK
SSVKNDYSTYRRAAQFLKVMSDSQSLQESQNLSMFLATQNKIRDTVKDALEKINGYEDLL
ADVVNICVQMFETKMYLTPSEKHMLVKVMGFGLFLMDSEACNINRLDQKKKIKLDRIDRI
FKNLEVVPLFGDMQIAPFNYIKRSKHYDPSKWPLSSSPNPPSPQADLMVHLPQIREEHQN
YISELSRYSNEVTTTFKEAGSDSENKAVTELCLRGLHLLSSWCSVLTELCSWKLLHPTDH
TTNPRCPPEAEEYERATRYNYSSEEKFAMIEVIAMIKGLQVLMSRMETVFTDAARRSIYA
ELQDFVQLILREPLRKAIKNKKDLIRSIIVSVRETCGDWARGCEPQQDPALRGKKDAEAS
FTIKVPRRNVGPSSTQLYMVRTQLEALISDKSGGRRTLRKDLDATTLQQIEAFHRQSFYW
TYLLNLADFLSKCCDLSQLWYREFYLEMTMGRKVNKCTVRHNHNEECNDLITMEKRIQFP
IEMSMPWILTDHILKSKEPAMMEYVLYPLDLYNDSAQYALTVFKKQFLYDEVEAEVNLCF
DQFVYKLSELVYAHYKQLASSMLLDKRYRAECAARGASTGCGAGRYASLLRQRHVALLGR
HVDLCALVAQRINSDMHRALDAAVAKFEAGDITGVVELEGLIAVNRLCHKLLSRYLTLDE
FEAILRESDHGVLAPYGRVTLHVFWELNYDFLPNYCYNAATDRFVKCRGIQFAAGVQREK
PQQYGHAMLWGSKQLSLAYSAQYAQYNGFVGPQHLHALVRLLGYQGVAVVVSELLGVARG
LLHGTLAQFTRALAAAMPRHCKLPRYDYGSNGVLGYYHAQLTDIVQYPDARTELFHAFRE
LGNIILFCMLIEQALSQEEVTDLLHAAPFQNILPRPYTAEGEKPETKQKRLEAKYSALQI
VQNVEKYGTAKQSQLSREGDLLTRERLCCGLSLFSVVLRRLRACLVAPQWPAPPTSHHAP
LHTDDTTEFHR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgagtgaaaaggtgtctctttccgatgctttgagcaatgtggatgttctggat
gagttgactttaccagatgaacagccctgtattgaggcagcaccctgctctatcctatac
caagcgaactttgacaccaattttgaggatcgcaatggctttgtaactggtattgccaaa
tatatcgaggaagctacaatccatgctaatctgaacgaactgctggaagagggcaacgct
catgcagtgatgctgtacacctggcggtgctgcagtcgcgctattcctcagcccaggtcc
aatgagcagcctgacagagtccacatatatgaacggacagtccaagtgctggctccggag
gtggataagttgctgcaattcatgtactttcagcgtaaagctatagagcgcttctgtggt
gaagttcgtcgtctgtgccacgcagagaagcgaagagacttcgtgtcagaagcatatctc
ctgacactcggcaagtttgtgaacatgttcgctgtactcgacgagctaaagaatatgaag
agttctgtcaaaaacgattactctacgtacagaagggctgcccaatttctgaaggtgatg
tctgatagccagagtctccaagagtcgcagaatctgtccatgtttctggccacccagaac
aagatcagagacacagtcaaggatgctttggagaagattaatggttacgaagatctgctg
gcagatgtcgtgaacatatgtgtccaaatgttcgagacgaagatgtatctaacgccatct
gagaagcatatgttggttaaggtgatgggtttcggactgttcctgatggactccgaagcc
tgcaacatcaacaggttggatcagaagaaaaagatcaaattggaccgtattgacaggata
tttaagaatttggaagttgtgccgttgttcggtgatatgcagattgcgccatttaactac
atcaagagatctaaacactacgatcctagcaagtggccattgtcgtccagtccaaatcca
ccatctccccaggccgacctgatggtgcacctgcctcagatcagggaggaacaccagaat
tatatatcagaactgtcgaggtacagcaatgaggtgaccacaacattcaaagaagccggt
tcagattcagaaaacaaggccgtaacagagctgtgccttcgaggactccatctgctctct
tcctggtgctcagtcctcacagagctgtgctcgtggaagctgctacatcccacagaccat
accaccaacccgaggtgccctcccgaggcggaggagtatgagagagcaacacgatacaac
tactcatctgaagagaagttcgctatgatcgaggtgatagccatgatcaagggtctgcag
gtgctcatgtctcggatggagacagtcttcacggatgcagcgcgccggtccatttacgct
gagctgcaagatttcgttcagttgatactgagagaaccgctccgaaaagcaattaagaat
aagaaggatttgatacggagtataatagtgtcagtgcgagagacatgtggtgactgggcg
agaggttgcgaaccccaacaggatccagctttacggggcaagaaggacgcagaagcgagc
ttcaccatcaaagtgccccgaaggaacgtgggtccatcgtccacccagctgtatatggtg
aggacgcagttggaagcgttgatatctgacaagtcgggaggtcgacgaactctacgcaaa
gacctggatgctaccacactgcagcaaattgaggctttccatcggcagagtttctactgg
acttaccttctgaatttggccgattttctctccaaatgctgcgatctgtctcaactgtgg
tatcgggagttttatttggagatgacaatggggcgaaaagttaacaaatgcacagtgaga
cacaaccataacgaggaatgcaacgacctgatcaccatggagaaacggatccagtttccg
atcgagatgtccatgccctggatcctcaccgatcatatactgaagagcaaagagccagcc
atgatggaatatgtgctgtatccgttggacttatacaacgactcggcgcagtacgcactt
actgtgttcaaaaagcagttcctctacgatgaagtcgaagctgaagtcaatctgtgcttc
gaccagtttgtctacaagctgtcggagctggtctacgcgcattacaagcagttggcttcc
agtatgctacttgacaaacgttaccgggccgagtgcgcggctcgtggggcgagtactgga
tgcggggcggggaggtatgcatccctgctaaggcaacgacacgtggctctactggggcga
cacgtcgacctgtgcgcactcgttgcgcaacggattaactcggatatgcatcgcgccctc
gacgcagcggtcgcaaagtttgaagccggcgatatcactggagttgtggaattagaaggt
ctgatcgcggttaacagactttgccacaaactgttaagccgctacttgaccctggatgag
ttcgaggctattctacgggagtcggatcacggggtactggctccgtacggcagggttact
ctccatgtcttctgggagttaaactatgacttcttgccaaattattgctacaacgccgct
accgatagatttgtgaagtgtcgcggcatccagtttgcggctggagtccaacgggagaag
cctcagcagtatgggcatgcgatgctgtggggttccaagcagctcagcctcgcttactcc
gcgcaatatgcccagtacaacggttttgtgggccctcagcatctgcacgctttggtgcgt
ctgcttggctatcagggtgtcgctgtggtggtttccgaactcctgggggtggcaaggggc
ttgctccacggaaccctggcacagttcacacgggccctcgcggctgcaatgcccaggcac
tgcaaactgccgagatacgactacggttccaatggtgtcctgggctattaccacgcgcag
ctgacggacattgtgcagtacccggacgcgaggacggagctgttccatgccttccgagaa
ctcggcaatatcatcctcttctgcatgctgattgagcaggccctcagtcaggaagaggtg
actgatctcctccacgctgcgcccttccagaacattctaccgcgtccatatacagctgaa
ggagaaaagccggagacgaaacagaagcgactcgaggccaagtactccgcactgcaaata
gttcaaaatgtggaaaagtacggaactgccaagcaaagccagttgtctcgcgaaggtgac
ctgctgactcgagagcggctctgctgcggtctctctctgttctccgtggtgctgaggaga
cttcgcgcttgtctggtggcgccccagtggccggcacctcccacttcacaccacgcgcct
ctgcatactgacgacacaactgagttccacaggtga
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