Leptidea sinapis (Wood White): 126977998
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Entry
126977998 CDS
T09272
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsin03009
]
126977998
Enzymes [BR:
lsin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
126977998
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
Other ribosome biogenesis factors
126977998
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
Motif
Other DBs
NCBI-GeneID:
126977998
NCBI-ProteinID:
XP_050683003
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Position
1:complement(32196806..32202510)
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AA seq
750 aa
AA seq
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MFEHSVKVPRNFKIAASIVKKVITEGGGVKNLLYDNKLRHFRTNVIYALVTETIKHDAEI
NKLFETTGLLEKEPRLDQWLAKVITTELLFGKKELPGGSKPEKTILSYREQFENIPRQPQ
VEVKPEVRRPRYVRINTNLLTTSDAISAFQDEGFRFIRCTSGPYDDYLSQIKTLTEYDFT
QDYHVKTMFVFHPSTKFHDYDLYLENKIILQDKATALPVQLLAPPQGSVIMDMCAAPGNK
TTQLAAFIRNQGKIYAVERNEERYKTLCDFVERTESKCVTTMHRDTLDIKRGECDDVEYI
VLDPSCSGSGMQLSVHSYVDDVRLARLTSLQEKFLKHAMNSFPNAKKIVYSTCSLFPQEN
ERVISNVVKQSRAKWKVLNVKEMLKDQWNNFGSGMYGEIGTRCLYSRPDSDLTTGFFLAV
LERDSKQQESQELKRKEQTEKNSLLSQNKIESLNDTEISNHCEQNSKTKGKKRKKMTTDV
CTDTIQEESEVCQNVIKVKKKKAILEDIQESNSMAETIECSGISVESDGNTQKRKTKKKK
KRIQDGEMVSDQDVIIAEEVIENSNEKKQTKLKKVDIVILETESEPNLNKKKKKKNKSSK
AESENVGHNSDHITRQDGGNLIDDTVINCEIERKSSSKKRNKSKDFLKENDSSGMEVLIE
SADVNNQIDYDKTNETIHSKKKKKKSKELTNNVELILHDDSQNLNAVDFEKDEQSSNKKK
RKSKDSEIIEDFVVDCHKKSKKKKTSKNIS
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacattcagtaaaagttcctagaaactttaaaattgctgcaagtatagtaaaa
aaagtaataacagaaggtggaggagtaaaaaatcttttgtatgataataaacttcggcat
tttagaacaaacgttatatatgcgttagttactgaaactattaaacatgatgctgaaatt
aataaactcttcgaaacaactggtctattagaaaaagaacctcgcctagaccaatggttg
gctaaagttatcactactgaattattgtttggcaaaaaagagcttccaggcggtagtaaa
cctgagaaaacaatacttagttatagagaacagtttgagaatattccccgccaaccacaa
gttgaagtgaaacctgaagttcgccggcctcgttatgtgagaataaatacaaatcttcta
acaacctctgatgcaataagtgcttttcaagatgaagggttcagattcatcaggtgtacc
tccggaccctatgatgattacttgagtcagataaaaacattaacagaatatgatttcaca
caggactatcatgtaaagactatgtttgtttttcatccaagtacaaaattccatgattat
gacttgtatttagaaaataaaattatattacaagacaaggcaacagctttaccagttcaa
ttattggcgccacctcaaggaagtgtcataatggacatgtgcgcagcccctggcaacaaa
acaacacaattagcagcattcatcagaaatcagggtaaaatatatgcggttgaaagaaac
gaagaaagatataaaacactctgcgatttcgtagaacgaactgagtcaaaatgtgtgaca
accatgcatagagatacattggacatcaagagaggggaatgtgatgatgttgaatatata
gtattggatccaagctgctcgggatcaggtatgcaactatctgtgcacagttatgtagat
gatgtcagacttgccagactaacttcacttcaagagaaatttttaaaacacgccatgaac
tcttttccgaatgccaaaaagattgtgtacagtacatgctctttgtttccccaagagaat
gagagagttatatcaaatgtagtgaaacaatcaagagctaagtggaaagtgttgaatgta
aaagagatgttaaaagatcagtggaataattttggatctggaatgtatggtgagatagga
acaaggtgtttgtattcgcgtccagattcagatctgactacaggttttttcctggctgta
ttagaaagagacagcaagcaacaagaaagtcaggaattgaaaaggaaagagcaaacagaa
aaaaattcattactatctcagaataagattgaatcattaaatgatactgaaatatctaat
cattgtgaacaaaatagtaaaacgaaaggaaagaaaaggaagaaaatgactaccgatgtt
tgtactgatacgatacaagaagagagcgaggtatgtcaaaatgtaattaaagttaaaaag
aaaaaggctatcctagaagatatacaggaaagtaatagtatggcggaaactatagaatgc
agtggcatatcagttgaaagtgatggtaatactcaaaaaagaaaaacaaaaaagaaaaaa
aaacgtatacaagacggtgaaatggtgagtgatcaagatgtaattattgcagaagaagta
atcgaaaattcaaatgaaaaaaagcaaactaaattgaagaaagttgatattgtaatttta
gaaacagaatctgaaccaaacttaaacaagaagaaaaagaaaaagaataaaagtagtaaa
gcagaatcagaaaatgttggtcataatagtgaccatattactcgacaagatgggggtaac
ttaattgatgacacagttattaattgcgaaattgagcgtaagtcttcaagtaaaaaaagg
aataaatcaaaagattttttgaaagaaaatgactcaagtggtatggaagtattaattgaa
agtgcagacgtaaataatcaaatcgattacgacaagaccaatgaaacgatccatagcaag
aagaaaaagaagaaaagtaaagaattaacaaataatgtagaattaattctacatgacgat
tcacaaaatcttaacgcagtagactttgaaaaagacgagcaatcgtcgaataaaaagaag
aggaaatctaaagattcagagataattgaagattttgtagtagattgccataaaaaatca
aaaaagaagaaaacatctaagaacatttcttaa
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