Leptidea sinapis (Wood White): 126978121
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Entry
126978121 CDS
T09272
Name
(RefSeq) transcription factor egl-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsin03000
]
126978121
Transcription factors [BR:
lsin03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126978121
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NOCA1_C
Motif
Other DBs
NCBI-GeneID:
126978121
NCBI-ProteinID:
XP_050682813
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Position
47:complement(509536..853073)
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AA seq
537 aa
AA seq
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MSSKRKSPPSKLQEGPPETQTPAAGPATLDFSDAVDSDDNEHHNFYKFSPSSSPRTSISE
EDHATYEDENPSKRQRFDQTLDMTNNLLVPSSFLSLHQVNDLQGRRRGSSECSSPGAEAK
VLGLCNNNNSLLNHNSALVLGPPHKRSMDDVLKRLTSKMNNSTIKEEKRPTPSTTPVKQN
NDRRGMLDAAALQALAGESVLEKERQLSEMILQLQMVREQLLAQQEHSKNIGNVSAELEL
QRLQQEHMRRQEMVRRGHSLYPGPHLGLLPLLEQMRPQPPPNSNVVQPSPWPPQTLAQMN
TRSPPPQDPDAPLNLSKQRTPSPAQSMMLPRFVPYPPMDESSPYMKKDDEYNTACNTSSW
GQSPSDEAEKAKLIRQPKRDEAGKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKI
LGARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKNLM
RTRRQEMRQLWCRDGGSELGFLPSLASPGPSNSSPPPNGSSYMTPGFSPPLSPGEDD
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaaaagaaaatcgcctccgtccaaattgcaagaaggacctcctgaaacacag
acaccagcagctggcccagcaactctggacttctccgacgctgtcgactcagacgacaac
gaacatcacaatttctacaagttctccccgagctcgtctccaagaacatcgataagcgaa
gaagaccacgcgacttacgaagacgaaaatccaagcaagaggcaaagattcgaccaaact
ttagacatgaccaacaatcttctagtcccatcgtctttcctaagtctgcaccaagtcaac
gaccttcaaggcagaagacgcggttcctcagaatgcagtagcccgggtgctgaggctaaa
gttttgggtctctgcaataacaacaattctttgctgaaccacaacagcgctttggttctt
ggaccgccccacaagcggtctatggatgatgtgttgaagaggctaacatctaaaatgaat
aatagcacaattaaagaggagaagagacccacgccgtcgacaacacctgtcaaacaaaac
aatgaccgaagagggatgctggatgcagcagcgttgcaggctttagcaggagagagtgtg
ctggagaaagagagacagctctccgaaatgattctccaactacagatggtgagagagcag
ttgctggcacaacaagaacattctaagaatatcggaaatgtgtccgctgagttggagctg
caaagactgcagcaggagcacatgagacgacaagagatggtgcgtcggggacactctctc
taccctggacctcacctgggtctactgccattactggaacaaatgcgacctcaacctccg
cctaactccaatgtcgtacaaccgtctccgtggccgccccagaccctcgcgcagatgaac
accaggtctccaccaccccaggaccccgacgcaccactaaatctcagcaagcagcggact
ccttcaccagctcaatcaatgatgctgcctagattcgtgccatacccaccgatggatgag
agctcgccttacatgaagaaggacgacgaatataatacggcttgtaacacatcatcttgg
ggccagtcgccttcagatgaagcagagaaggcaaaactgattcgtcagccaaaacgcgac
gaagctggtaaaccccacatcaagcgaccaatgaacgctttcatggtgtgggctaaagat
gaacgccgtaagatcctcaaggcctgtcctgacatgcacaattccaatatttctaaaatc
ctgggagctagatggaaggcgatgtctaatgctgagaagcagccttactatgaagagcag
tcaagattgtccaaactgcatatggagaaacaccctgattacagataccgaccgagacca
aaaagaacttgcatcgtcgacggcaagaagatgaggatatcggagtacaagaacctgatg
cgcacgcggcgtcaggagatgaggcagctctggtgccgggacggtggaagcgagctgggc
ttcctgccctctctcgcgtcccccggaccttcgaactcatctccgccgccaaacggcagc
agctacatgaccccagggttctctccccctctgtctccgggcgaggacgattga
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