Leptidea sinapis (Wood White): 126978204
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Entry
126978204 CDS
T09272
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsin01001
]
126978204
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsin04121
]
126978204
Enzymes [BR:
lsin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126978204
Protein kinases [BR:
lsin01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
126978204
Ubiquitin system [BR:
lsin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126978204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
Bromodomain
PHD
Motif
Other DBs
NCBI-GeneID:
126978204
NCBI-ProteinID:
XP_050682941
LinkDB
All DBs
Position
47:7855986..7893499
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AA seq
970 aa
AA seq
DB search
MDNNVFQSGGCGEDLEQALMDLGPLLGVTIKEEAPDEPSDSSAAASRANVSSVQDGAGNS
GGEVTSKGEPTDGVDSLASPAASRTSFLSIKCVYCQAVLAQTEGSPKLMECLHSACESCV
KTKVEEKLAGSRDFLGAGRVSILCAACRLQCQPNNMIDQRFVLEKVAMEQAGTNGNMSGD
QQCNSCEDTEPATSYCVDCAEFICDNCVLAHQRLKITKDHSIKSKEEALQELQAAQSGTQ
AAHEMFCRDHPQERLSLFCETCDRLTCRDCQLQHHRDHKYQFSSEMATQARASISSLVSE
VSYKRVLLGSAMKVIRDRQQLIAEKKKALVHEITQTVVKLTNAINTRGKQLVLRLNEVCD
AKQRTLGEKKEALQQLAAITDHCLRFVSAALEQGSDTAVLYSKRAVSSHLQRIKSRRADI
PNPEIPVRITLALDNLPDLVRVLSSLGAIVVDGKVDGGASPAPGPAPATPTPPAAPAPAP
PAAPHYAAHSPHSAVMALQQAAMQQTMARYQSFVGGYMGRPRAHTPLRQPHVTSTTHPHH
LHGMNEMNLRGLLNANARGSGRPALTMHPHQQTHQHQHVTHPYQHMMTAYGGGAAQTACA
ASGRRSGGPRTPSPAPAAAPVYPPAKWHIPQHSGGADSGASGGAAGGADYKITLGGRQQP
ATPGRSALVTSTNPKTPSPGLHGGAAMGLGGHAGVAGAAQACELDKVCAESVQDLMATIA
KLDSNGVQVVPETPAQPSPSPALVHSSTDSTCSXPGGGLMXLFSKAAGPARAAAAAGAGD
PNEDWCAVCMDGGELMCCDKCPKVFHQYCHIPAVEKLPEPTESWQCLLCVNFAEVPEDGV
GAGAGELGGRRRRVVERITLELYCQYELSLQFREPALYAAMHHLQPMCLDMIRMKLQPRS
PDRYTHEAQFVADCRLLFRNAYRNNPADSQIYKDARRLEEFFDAQLVKWLPEYAYWSGEG
EPPAKRSRLD
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggataacaacgtgttccaaagtggtggatgcggagaggatttagaacaggcactcatg
gacttgggtccacttctcggagtcaccatcaaggaggaagctccagatgagccttcggat
agctcagccgccgcttctcgagcaaatgtgagcagtgtacaagatggggctggcaacagt
ggaggggaggtcaccagcaagggcgagccaactgatggagttgattctctggcctcacca
gcagcttcccgaacctcattcctcagcatcaaatgtgtatactgtcaagcagtgcttgca
cagactgaaggttctcctaagctgatggagtgtttacattcagcttgcgaatcctgtgtc
aaaaccaaggtggaagagaagctggctggaagcagagacttcttaggtgctggtcgagta
tcaattctttgtgcagcatgtagactccagtgtcagccaaacaatatgatagatcagaga
tttgtgctggagaaggttgccatggaacaggctggaaccaatggtaacatgagtggtgat
cagcaatgcaacagctgtgaagacacggagcctgcaaccagctactgtgtagattgcgcc
gagttcatctgtgacaactgtgtgcttgcccaccagagattgaaaataacgaaagaccac
agcattaagtctaaagaagaagcgttgcaagagttgcaggctgcacagagcgggacacag
gctgcgcatgagatgttttgtcgagatcatccccaggagcgcctcagtctgttctgtgag
acgtgcgaccggctcacgtgccgcgactgccagctacagcaccaccgcgaccacaaatac
cagttcagcagcgagatggccacccaggcgagagcgagcatatcatcgctggtgtcggag
gtaagctacaagcgagtgttgctgggctccgccatgaaggtgattcgcgaccgacagcaa
ctcatcgccgagaagaagaaggcactcgtgcacgagatcacgcagacggtggtcaagttg
acgaacgcgatcaatacccgcgggaaacagttagtgctgaggttgaacgaggtgtgcgac
gccaagcagcgcaccctcggagagaagaaggaggcgctgcagcagttggccgccatcacg
gaccactgtctgcgcttcgtgtccgctgcgctggaacagggcagtgacacggcggtcttg
tacagcaagcgggccgtgagttcgcacctgcagcggatcaagagtcgccgcgcagacatt
cctaaccccgagatccccgtgcggatcacactggctctcgacaacctgcccgaccttgtg
cgagtgttgtcgtcgctgggggccatcgtggtggacggcaaggtggacggcggcgcgagc
cccgcccccggccccgcccccgcgacccccacgccgccggctgcccccgcccccgcgccc
cccgccgccccgcactacgccgcccactccccccactcggctgtgatggccctacagcaa
gccgcaatgcagcagacgatggctagatatcagtcgttcgtgggcgggtacatgggacgg
cctcgcgctcacacgccgctccgacagccgcatgtcacctccaccactcatccccaccac
ctgcacggtatgaacgagatgaacctccgcgggctgctgaatgccaacgcgcgagggtcc
ggccggcccgctctcaccatgcacccgcaccagcagacacaccagcaccaacacgtgacc
cacccctaccaacacatgatgaccgcgtacggcggcggcgcggcgcagaccgcgtgtgcg
gccagcgggcgccgcagcggcgggccgcgcaccccgtcccccgcgcccgccgctgcgccc
gtctacccgcccgccaagtggcacatcccgcagcacagcggcggagcggacagcggcgcg
agcggcggggcggcaggcggcgcggactacaagatcactctgggcgggcggcagcagcca
gctacgccgggccgcagcgcgctcgtcacctccaccaaccccaagacacccagccccggc
ctgcacggaggtgcggcgatgggcctgggcgggcacgcgggcgtggccggcgcggcgcag
gcgtgcgagctggacaaggtgtgtgcggagtccgtgcaggacctcatggccaccatcgcc
aagttggactccaacggcgtgcaggtggtgcccgagacgccggcgcagccctcgccctcg
cccgcgctcgtgcactcctccaccgacagtacgtgctcctgacccgggggggggcttatg
taactctttagcaaggcggcgggccccgcgcgcgctgcggccgccgcgggcgcgggagac
cccaacgaggactggtgcgccgtgtgcatggacggcggcgagctcatgtgctgcgacaag
tgtcccaaggtgttccaccagtactgccacatccccgccgtcgagaagctgcccgaaccg
acggagtcgtggcagtgcttgctctgcgtgaacttcgcggaggtgccggaggacggggtc
ggagcgggagcgggcgagttgggcggtcgccggcgccgcgtggtggagcgcatcacgttg
gagctgtactgccagtacgagctgtcgcttcagttccgcgagcccgcactctacgctgcg
atgcatcacttgcagccgatgtgcctggacatgatccgcatgaagctgcagccgcgctcc
cccgaccgctacacgcatgaggcgcagttcgtagcggactgccggctactgtttcgcaat
gcgtacagaaacaacccggccgactctcagatctacaaggacgcgcgcaggctggaggag
ttcttcgacgcgcagttggtcaagtggctgccggagtacgcgtactggagcggcgagggc
gagccgcccgccaagcgctcgcggctggattga
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