KEGG   Leptidea sinapis (Wood White): 126978228
Entry
126978228         CDS       T09272                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03030  DNA replication
lsin03410  Base excision repair
lsin03420  Nucleotide excision repair
lsin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126978228
   03410 Base excision repair
    126978228
   03420 Nucleotide excision repair
    126978228
   03430 Mismatch repair
    126978228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsin03032]
    126978228
   03036 Chromosome and associated proteins [BR:lsin03036]
    126978228
   03400 DNA repair and recombination proteins [BR:lsin03400]
    126978228
DNA replication proteins [BR:lsin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126978228
  DNA Replication Termination Factors
   ELG1-RFC complex
    126978228
Chromosome and associated proteins [BR:lsin03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126978228
DNA repair and recombination proteins [BR:lsin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126978228
  Check point factors
   HRAD17(Rad24)-RFC complex
    126978228
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 AAA_lid_RFC1 RCF1-5-like_lid nSTAND_NTPase5 Rad17 RuvB_N Viral_helicase1 AAA_18 AAA_11 nSTAND3 MeaB AAA_19 Mg_chelatase AAA_5 AAA_assoc_2 MipZ IstB_IS21 RNA_helicase AAA_24 ABC_tran NTPase_1 AAA_25 AAA_23 AAA_28 CbiA AAA_30 AAA_3 SRP54 bpMoxR
Other DBs
NCBI-GeneID: 126978228
NCBI-ProteinID: XP_050682948
LinkDB
Position
47:complement(7905365..7908866)
AA seq 346 aa
MSDDDVVLMEVDDVQPVSKPAPATVAVKATSHLPWIEKYRPQTFADIVGNEDTVSRLAVF
ARTGNAPNIIIAGPPGVGKTTTILCLARALLGTAFKDAVLELNASNDRGIDVVRNKIKMF
AQQKVTLPAGRHKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQS
RCAVLRYSRLTDAQILAKVIEVCQKENLSYTEEGVNAVVFTAQGDLRSALNNLQSTAQGF
RHISPDNVFKVCDEPHPMFIKTMLESCLKQDIHSAYKVMAKLVKLGYAAEDIVSNIFRVC
KGLETSEDVKLALIREIGVTHMRLADGLSSSLQLAALLARMCQANA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgtctgatgatgatgttgtactaatggaagtggatgatgtgcaaccggtctctaagccg
gctccagcaactgttgctgtcaaggcaacgtctcatttgccgtggattgaaaagtaccga
ccacaaactttcgcagatattgtgggcaatgaagacacagtgtcaagacttgcggtgttt
gcccggacgggaaacgcgcccaatatcatcatcgctggtccccctggtgttgggaaaacg
acaactatactttgtctagctagagcactgcttggtactgcattcaaggatgctgtgctt
gagctgaatgcctcaaatgacaggggaatagacgtagtacgcaataaaattaaaatgttt
gctcaacaaaaggtgactctaccagcgggtagacataagattgtgatactggatgaggca
gacagcatgacagatggagcccagcaggccctgagacgcacaatggagctgtactccagc
accacaaggtttgctctggcagccaacaacagcgagaagataattgagccaatacaatct
agatgtgctgttctcagatactctcgacttactgatgcacagatattagcaaaagtcata
gaagtatgtcagaaagagaacttatcatacaccgaggaaggagttaatgctgtggttttc
acagcccagggagacttaagatcagctctgaacaatctacagtccacagcacaaggcttc
aggcacatcagcccagacaatgtattcaaggtgtgtgacgagccgcaccctatgttcatt
aagaccatgcttgagtcctgtttgaagcaggacatacattctgcatacaaggtaatggcg
aagctagtgaagctggggtatgcagcagaggatattgtgagcaacatattccgtgtgtgc
aagggcctggagacctctgaggatgtgaagctggcactgatccgagagatcggagtgact
cacatgcggctggcagatgggctcagctcctcattgcagctagccgctcttcttgcccgg
atgtgtcaggcaaacgcttaa

DBGET integrated database retrieval system