Leptidea sinapis (Wood White): 126978605
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Entry
126978605 CDS
T09272
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsin03009
]
126978605
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
126978605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_GNC1
Motif
Other DBs
NCBI-GeneID:
126978605
NCBI-ProteinID:
XP_050683521
LinkDB
All DBs
Position
Z:complement(31314270..31338073)
Genome browser
AA seq
2748 aa
AA seq
DB search
MKPKPVKHKTTNTFRFVPFAERINSIDIRHAALYHIEHVYASQPEDNETHFHLAIQKWHA
LNLTENFKKFKKEVFGIITVPQLIHKKEDVIKLLQQYISLDDQLCLQPFLEILVSLAKDL
RSDFYPYFPDILDILIKLLDTKDAEKLEWTLICLAFLFKILKPYLKKDITLVLTRIIPLL
SETKPQYINNFAAESFAFVARDIKDKKKFVESLLSYLEKHDDALTGSGHLIFEILRGVGN
KFHNCIETFLPILLTQLNENKAHQEILFKVLTQALEDSLQTISVKEYLFFWSNVIKYTEE
LSNQDGNKGLEYILKLSGQVISHQNGKYLLNPQQYTMMLVKVVCAQSSESVLEVCAQIGA
LLLLSPNIILSQEHAGVLVKVILPLPFPNILVNFVQNVIGYSQFDMHILPHFLNFVVQSD
FDSDAMSTLAKICLQKSPLSLNGLKLFEWVKYPLDFGKGLPLVMKYIEKVLSCDLENVVE
NPIDLMNLLFCLPHIERFDVDLCLSYISSLVDKLLKVLSTYNLEQKDTNKFHSDTTAISS
CARKVLFILVATVECAVHISSCKRIKEICNIEVFLPIIVPCAADPNYLVSLHLLDLYLTA
YDYENKLSYSYLLLIDSYIRCNVSSPFHIVRLLTTHIYKLFENIEEFNKTVEIGGETERF
SVFSKCYEVESIPPSIQEYRAQLNILQKMTFNTTQYELAKETEFGLFALNYMLGLLYINF
KLLWEPVVEFIAGYGNAINIEEFWPVYHKAMESAFENAKQNLKTFKFNEEMLVENEIIKE
LYVEYNNINERPDLYNYRNLILKIMTNCIHVCEAKNRDVVALFLKFIDEEYRHNPNTNAL
KIDIETHENQVKDVDNESTKLEEEIQEIEEPDIEKDSVSGKVIFKTLINIMQVLSRFKNP
RALYKESVFRELFLEFLKHKNPGLQKYALECIINYKNKSIVAYKDNLHNLVDEKKFKDEL
AQFKITADSEAIQPEDREHVIPIILRILYGKMTSKLGADKKGGGQTRRSLVMRYISGCKE
EELKMFIELAFSYFYEYINLEPRQIKDKIYNNLDLKSVTSPGKIYSVLSLFDVVREYFGG
YMKDALLSSLLNIFYAVCSHIAAILLQVDKVHVSYVKVMKNLRTLAITSLEKIFDHFDKY
AWTKDELYVIFATLIWPMLPRLHIEGIHSPTALLKLLNIWCLNPRYYCLLITYPEQGPQL
SVLPEIFKLLLAPKTSPSVVNMILDMVEKLLTLTEDDEDKEIPPIKSFQKLNVVSENMDI
NFGSKILIPHLPSILDVMKRRVANSAKSNTVNKRDLLILSRVTEMVTTPEMCDDLLSLLL
PILVKKVCMNMAEENMEHAINTIINLLGHSSNPHLYIKNIAILFNKVNLVEVRKLLIKLL
FSIAESASANKENLKKTADVICEMNAFNKRWIEQPDFDRRLDAYKNIYQMLDNNEIDVDL
SILIVNNCFFYIRTEKDIGLRDSAGLCLKRILPKLLQRYRSTNDGQFLVRDTVLSLISTG
IRDKKNDILRNESIMILGELVRECPDADVVLSDLVPLANKEDREVDFFENSCHLQLHRRV
RALQKFSKVARKMTKCPTPRTITNFILPLATMHICDDTYSDKNTLIDACIDVISTCCRLL
PWYHYEVILKLYLNKLRYSTEHQKQLIRILVSIIDAFHFDFSKLKNIELPKALTTNIKSI
ETEKGESDKINEKMSKDNESDTEDIDEGRVEEMEEVLLTADDTEHKDDLVSKDIDDVPAF
ERVTTVSPSVANRIIKSLTAGLLPQLNRSIGKLTEHEESHKVNRKRTGFMRQEEDMLRVP
IALALVKLLQRLPGDILKHQLPGIIIKLCSFLKSPLKQVRIAARDIVKKVMVTVGSSYLG
ILLKHLTLLLTRGFQVHVLVSTVHTVLDALKTDFKAEDIDQNLGNILDICTNDLFGQLSE
EKEVEKLHYKTPEAKPSKKSYVTLMIVAQNISQKCLINLVLPFKEVLQKHHSKKIVMKVQ
DALMHITSGLVTNKFIEMEHLFPFLHGIASESIPEFVLSAPKRVLTEEQKEKILRAKPDC
YIIPETPKRNKESQARHVKTSTKTNAHVLVEFSLNILYVILKREKVPRIDCKAFIDPLVP
LLADAVRGDHVKVITVALKCITTLWIIRISTPTLEEMVSDIVKAIFLILHKYATSEISTQ
NDNYQLVRTAFKAVTALIRNVKYYKLEEDQLKTLLLYAEEDCQNAEKQANSFSLLKAILE
AKLVSTELHEVMQKVANICILSESARSRDEARGIFVSYLTNYSPGKRLARYIDFFVTQLN
FELQHGRESSLKFLEMIINKLQPVVLQKHSDFMFLALGACMLNDTAPECRAHAARCIETM
LNKMAAADRNRLFELVLKFFEDTQPIHFELAAQLCIRFVNVEQDNFKNRIENILALLSGK
ILLLSNDIGEGRFVKIHLDGSAESNEEHQKEKDHSLIQILNLIDRIAVHCAFSLKSEKFE
DSYDDIAQHCQALLAYPHAWVRLRAAKILGHILDSVDSDLLQREQCERGFIYFDTENTLK
SLILDLCAQYTPNLDKEMADQVTEVLFIILKLVHSMPGYKLTNKNDDDTDNIAKVNIRWI
LFKLRKAINVEVAKSPKCMNIRTAIFTMWLHFLNLLENDDLNKVVDVILPPIVREVSTGD
LGAPASAARQLAGRLGKKLRRKLGEIEYGKMAADVQTKLNVKRAERKKLLLQEKVNDPEK
AAKRKLQLREKKKQAKKIKLEMLHGKRPRGKKRKAEDIDFEDQLLNDN
NT seq
8247 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctaaaccagttaaacacaagaccacaaacacttttcggtttgttccttttgct
gaacgaataaattctatagatattcgacatgctgctctttatcacattgaacatgtatat
gccagtcagccagaggataacgaaacccatttccatttagcaattcaaaaatggcatgca
cttaacttgactgagaattttaagaagttcaaaaaggaagttttcggtataattactgta
ccacagctgattcataaaaaggaagatgtgataaaattactacaacagtatatatctttg
gatgatcaattatgtctgcaacctttcttagaaattctagtttctttagcaaaagacctc
cgaagcgacttttatccatactttccagacatcctagatattctaataaagttattggac
acaaaggatgcagagaaattagaatggacactaatatgtctagcatttctattcaaaata
ttgaaaccatatttgaaaaaagatattacattagtattgactaggataatacctttgctg
agtgagacaaagccacaatatattaataattttgctgcagaaagttttgcatttgttgcc
agagatataaaagataagaagaaatttgttgaatcactgcttagctatttggaaaagcat
gatgatgctttaacgggatctggtcatttgatatttgagatattaaggggtgtgggaaat
aaatttcataattgtattgaaacctttttacctatactactcacccaactaaatgaaaat
aaagcacatcaagagatattgttcaaagtccttacacaagctcttgaggacagcttacaa
acaatatcagtcaaagaatatttgtttttctggtcaaatgtaattaaatacactgaggaa
ttgtcaaatcaagatggcaacaaaggattggaatacatacttaaattatccggccaagta
ataagtcatcagaatggaaaatatctgctgaatccccaacagtataccatgatgcttgtc
aaagttgtatgtgcacaatcatctgaaagtgtacttgaagtttgcgctcaaattggagcg
ttactgcttctgtctccaaacattattctttcacaagaacatgctggtgttcttgttaaa
gttatactgcctctaccttttccaaatattttagtaaattttgtccagaatgtaattgga
tactctcaatttgacatgcatatattaccacatttcttaaactttgttgttcagagtgat
ttcgattccgatgctatgtctacactagctaaaatctgcttacaaaaatcgccattgtct
ctgaacggacttaaactttttgaatgggtaaaatatccgcttgattttggaaaaggctta
ccacttgtaatgaaatatatagaaaaagttttgagctgtgacttggaaaatgtggtagaa
aacccaatagacttgatgaatttattattttgtttgcctcatattgagagatttgatgtt
gatttatgtttaagttacattagcagccttgtagataaattgctaaaggttttatcaaca
tacaatttggaacaaaaagacacaaataaatttcacagtgatacaacagctatatcttct
tgtgctaggaaagttctgtttattctggtagctacagttgaatgtgctgtacatatatca
agttgtaaaaggattaaggagatatgtaacattgaagtatttctgcctattatcgtacca
tgtgcggcagatcctaactatctagtatctctgcatcttcttgatttatatttgacagca
tatgactatgaaaataaattgagttattcatatttgttactgattgattcatatatcaga
tgcaatgtgtcgtctcctttccacatagtaagacttttgacaacacatatttataagtta
tttgaaaacattgaagaatttaataaaactgtggaaattggtggggaaacggaaagattc
tctgtatttagtaaatgctatgaagtagaatctatacctccttctatacaagaatacaga
gctcaattgaacattttgcagaaaatgacattcaacactacacaatatgagctcgctaag
gagacggaatttggattgtttgctttgaactatatgctaggattactgtatattaatttt
aaattactatgggaaccagttgttgagtttattgcaggctatggtaatgctataaatatt
gaagagttttggcctgtataccacaaagccatggagtcagcctttgaaaatgcaaagcaa
aatctaaaaacctttaaatttaatgaagaaatgcttgttgaaaatgaaataataaaagag
ttgtatgttgaatacaataacatcaatgaaaggcctgatttgtacaattacagaaattta
attttgaaaataatgacgaattgtatacacgtttgtgaggcaaaaaatagagatgtggtt
gcactctttttgaaatttattgatgaagaatatcgtcacaatcctaacactaatgcattg
aaaattgacattgaaacccatgaaaaccaagtaaaggatgttgataatgaaagcacaaaa
cttgaagaagaaattcaggaaatagaggaaccagacattgaaaaagattctgtttctggt
aaagttattttcaaaactttaattaatataatgcaagttctgtcccgttttaaaaatcct
agggcactttacaaggaatctgttttcagggaattatttttagaattccttaagcataaa
aatccaggacttcaaaaatatgcattggaatgcattattaactacaaaaataaaagtatc
gtagcttataaagataacttgcacaatctagttgatgaaaagaaattcaaagatgaatta
gcacagtttaaaataactgcagattctgaagcaattcaacctgaagacagggaacatgtc
attcccattattcttagaatactttatggaaaaatgacgtcaaagttaggtgctgataaa
aaaggcggaggacaaactaggaggtctcttgttatgagatatataagtggctgcaaggag
gaagaattgaaaatgtttattgaattggcattctcatatttttatgaatacataaactta
gaacctcgacaaataaaagataagatatataacaacttagatttaaaatctgtgaccagt
cctggaaaaatatatagtgttttaagtttatttgatgttgtcagagaatattttggtggg
tatatgaaagacgcattactttcgagtcttctaaacatattttatgcagtctgctcacat
atagctgctatacttttgcaagtagacaaggttcatgtcagctatgtcaaagtgatgaag
aatttaaggacattagcaatcacgtcgctagaaaagatatttgaccactttgataaatat
gcttggactaaagatgagctgtatgttatttttgcaactttaatatggccaatgttacca
agattacatatagaagggattcacagtccaactgctttgctaaagttattgaatatttgg
tgtttaaatccaagatactactgtctacttataacatatccagaacaaggaccacaactt
agtgttttgcctgaaatattcaagttactgttagctcctaaaacttctccaagtgttgtg
aatatgattcttgatatggttgaaaagttattgaccctaacggaagatgatgaagataaa
gaaatacctcctataaaatcatttcaaaaattaaacgtagttagtgagaatatggatatc
aacttcggaagtaaaatcctcattcctcatttaccaagcatcctagatgttatgaaaaga
cgtgttgcaaactctgccaaatcaaatacagtaaataagagagacctattaatactttca
cgggttacagaaatggtaacgactccagaaatgtgtgacgacttattgagtcttttgctt
cctattctcgtcaagaaagtgtgcatgaacatggcagaagaaaatatggaacatgccatc
aatactataataaatcttttaggacatagttctaatcctcatctgtacataaagaacatt
gcaattcttttcaataaagtgaatttagttgaagtaagaaaacttctcataaaactatta
ttttccatcgcggaaagtgcatctgcaaataaagaaaatcttaagaagacagctgacgta
atttgtgaaatgaatgcttttaataaaagatggatagaacagccagattttgatagaaga
ttagacgcatacaagaatatatatcaaatgttagataacaatgaaatagatgtagattta
tcaattcttatagtaaataattgtttcttctacatccgaacagagaaagacattggattg
agagatagtgcaggtctatgtttaaagagaatacttccaaaattgctgcaacggtataga
tctactaatgacgggcagtttctggtgcgtgatacagtattatctcttatttctacggga
atacgggataagaaaaatgatatattacgcaatgaaagcataatgatactgggtgaactt
gtaagggaatgccctgatgcggacgttgtgttgtcagatcttgtaccgttggctaacaag
gaagatagagaagtagatttctttgagaattcgtgtcatttgcaattacataggcgagta
cgagctttgcagaaattttctaaggttgcacgtaaaatgaccaaatgtccaacaccaagg
accatcacaaattttattttacctttagctaccatgcatatttgtgacgatacatattcg
gataaaaatacgcttatagatgcatgtatagatgtaatatcaacatgctgtagactgtta
ccgtggtatcactatgaagtgattttaaagttatatctaaataaattgaggtactcaact
gaacaccaaaaacagttgatccggatactggttagcattatagatgcttttcattttgat
ttttcaaaattgaaaaatattgagcttccaaaagctttgactacaaacattaaatcgata
gaaacagaaaaaggagaaagtgataaaataaatgaaaagatgtcaaaggacaatgaatca
gacacagaagatattgacgaaggaagagtggaagaaatggaagaagtactattaacagca
gatgatacagaacataaagatgatttagtgagtaaagatatcgatgatgtaccggctttt
gaaagagtaacaactgtatccccgtcagttgcaaatagaattataaaatccctgacggct
ggtttattgccacaacttaataggtcaataggtaaattgactgaacatgaagaatcccat
aaggtgaaccgaaagcggactggctttatgagacaggaagaggatatgttgcgagttccc
atcgccttagcgctggtgaaattgttgcagcggctgcccggggatatactaaagcatcaa
ctgccgggaataattatcaagttatgttcattcctgaaatcgcctctgaaacaagttaga
atagccgctcgtgatattgttaagaaagtaatggtgacagttggctcctcatatttagga
atattactgaaacatttaacgctactcctaactcgaggcttccaagtccacgtattagtt
tccactgtacatacagtactagacgccctaaagacagactttaaagcggaagatatcgac
caaaatttgggcaacatactagatatttgcaccaacgacttatttggacaactttccgaa
gagaaagaagtggaaaaactacattataaaactccagaagcgaaacccagcaagaaaagt
tatgttactctaatgattgttgcacagaatatatcacagaaatgtttgataaacttggtt
ctgccattcaaggaagttttgcagaaacatcactcgaaaaaaatagtcatgaaagtacaa
gacgcactgatgcatattacaagtggtttggtgaccaataagtttatagaaatggagcat
ttgtttccgttccttcatggcattgcatcggagagtataccagaattcgttctttccgct
ccgaaaagggtgttgacagaagaacagaaggaaaagatattaagagcgaaaccagattgt
tacatcattcccgaaaccccgaaaagaaataaagaatctcaggcgaggcatgttaaaacc
agcaccaaaactaatgcgcatgttttagttgaattcagtttgaatattttatatgttatt
ctgaaaagggagaaagtaccaagaatagattgtaaggcatttattgatccattggttccc
ttattagcagatgcagtgaggggtgatcacgttaaagttataacagttgcattgaagtgc
attactacattgtggataattagaattagtacaccgactttagaggaaatggtttcggat
attgtgaaggctatctttcttattctacataagtatgctacctccgaaataagcactcaa
aatgacaactatcaacttgttagaactgcttttaaggcagttactgcgctcattcgcaac
gtaaaatactataagttagaggaagaccagctcaagacattgttgttgtatgcagaagaa
gactgtcagaatgccgaaaagcaagcgaactcattttcactgctgaaagcaattttagaa
gctaaattggtgtctacggagctacatgaagtcatgcagaaagtggcaaacatttgtata
ctaagcgagtctgctagatctagggacgaggcaaggggtatatttgtatcatacctcacc
aactactcgccgggaaagcggctggcgagatacatagactttttcgtgacgcagctgaac
ttcgaacttcaacacgggagggaatcgtccctgaagtttctggaaatgatcatcaataaa
ctacagccggtggtactacaaaagcacagtgacttcatgttcctagcgctgggtgcgtgc
atgcttaacgataccgcgcctgagtgtcgtgcgcacgcggctcgctgtattgagacaatg
ttgaacaaaatggcggccgccgatcggaacagacttttcgaactggtactcaagtttttt
gaggatacccagccgatacattttgaattagccgcacaactttgcattcgttttgtgaac
gttgaacaagacaacttcaagaaccgaatagaaaacattcttgcgttactcagcggcaaa
atactgctcctaagcaacgatataggcgaaggaagatttgttaagatccatcttgatggc
agtgcagagtcgaatgaagaacatcaaaaggagaaagaccacagcttaatacagatccta
aatttaatcgatcgaatagctgtgcattgcgcgtttagtttgaaaagtgagaagtttgaa
gacagttacgacgatatagcacagcattgtcaagcgttgctggcatatcctcacgcttgg
gttaggttgagagctgctaagatcttagggcatatactagattcggtggatagtgatttg
ttacagagagagcagtgtgaacggggctttatatattttgatactgagaatacgcttaag
agtcttatattagatctgtgtgcgcagtacacgcccaatttggacaaagaaatggcagat
caggtcaccgaagtgctatttataatattaaaactagttcatagtatgcctgggtataag
ctgacgaacaagaatgacgacgatacagacaatattgctaaagtgaatatcaggtggata
ttgttcaagctgaggaaggctatcaacgtggaagtcgctaagtcgcccaaatgtatgaat
attagaactgcaatattcacaatgtggttgcatttcttgaaccttctagaaaatgacgat
ttaaataaagtcgttgatgtaatattgccgccgattgttcgagaagtttcgacgggtgat
ttgggagctcccgctagtgctgccaggcagctggctggaaggctcggcaagaagttgagg
agaaagttgggcgaaatagaatacgggaaaatggcggccgatgtacaaacaaagttgaat
gttaagagggcagaaaggaaaaagcttctgctacaagagaaagtgaacgaccccgagaag
gcagcgaagcgaaagctccaactaagggagaagaagaagcaggcgaagaagataaagctg
gagatgctacacggaaagcgtccgcggggcaagaaaaggaaagcggaagatattgacttt
gaggatcaactgcttaatgataattag
DBGET
integrated database retrieval system
