Leptidea sinapis (Wood White): 126978680
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Entry
126978680 CDS
T09272
Name
(RefSeq) structural maintenance of chromosomes protein 3-like isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsin03036
]
126978680
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lsin00535
]
126978680
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
126978680
Meiosis-specific proteins
Cohesin complex and associated proteins
126978680
Proteoglycans [BR:
lsin00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
126978680
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
HAUS1
DUF1702
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
126978680
NCBI-ProteinID:
XP_050683633
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Position
Z:complement(21172489..21204796)
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AA seq
1212 aa
AA seq
DB search
MECASQNLHKRVEIKKVIIQGFKSYREQIVVEPFDKRHNVVVGRNGSGKSNFFHAIQFVL
SDEFSHLRPEQRLGLLHEGTGPRVISAFVEIIFDNSDNRIPIEKDEIFLRRVIGSKKDQF
FLNKKVVPRSEVLNLLESAGLSNSNPYYIVKQGKINQMAIAPDSHRLKLLREVAGTRVYD
ERREESVTILKETVGRVEKINEYLQTIEERLKTLEEEKEELKEYQKWDKARRVLEFIVHD
TEHRENKRKLEELQKVRANSGKEQQQYADLVRDAQEHVRESNKKLKDARKDVAAAREEKD
ILTTELQQLLREKTKLEMGIKDLTDDVDGDNKSKERAEAELERLRQQISEKERELEELKP
KYEEMRAREEECTRALALNQQKRQELYAKQGRGTQFRSKQDRDKWIEKELKSLSKQIKDK
KDHEIKLRDDLRRDASKLTELEKRIEELTKEMERQRVAIDEHNKQYYECKKRKDQEQCTR
NELWRKETTLTQNLSSLKEDLAKADQALRSMAGKPILNGRDSVRKVLETFQERGGEWANI
ATQYYGPVIENFTCDKTIYTAVEVTAGNRLFHHIVESDTVGTKILKEMNRQTLPGEVTFM
PLNRLQVRDMSYPNDNNAIAMVHKLKYDPKYAKAMKYIFGRTLICRNLECATELGKQYHL
DCVTLEGDQVSSKGSLTGGYFNQSRSRLEMQKTRSELMEQITTLEEELNQLREELNKTET
NINSIVSDMQRTETKQGKAKDIFDKVKADIRLMKEELSSIERFRGPKERSLAQCHSSLEA
MQATKEGLESELHQELMEQLSTADQGKVDELNDAIRRLTQENKEAFSQRMNLEANKNKLE
NLLTNNLIRRKEELVQALQEISVEDRKRRLQNSKSDLNASEKRIKQINKELEEVEKKVVA
AVKNEKALKIELDKWRNKEKEAHDKMAEDTKDLEKLASKEVFLQEKIQESLDKIAALGTL
PNAPDLHTKYEKMSLKQLFKELEKANQHLKKYNHVNKKALDQFISFSEQKEKLYKRKEEL
DIGGEKIRELIETLEHRKLEAIQFTFKQVSKNFTEVFKKLVPQGRGSLIMRVADELDVNP
DRANAEQFCGVGIRVSFTGGDGDMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEI
DQALDAQHRKAIANMIHELSSSAQFITTTFRPELLEHAHKFYGVKFRNKVSHVECVSLAE
ARDFVEDSATHA
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgcaagccaaaatctccacaaacgagtggaaataaaaaaagtaattattcaa
ggctttaaaagctaccgggagcaaatagttgtggaaccatttgataaacgtcataatgtt
gttgttggacgaaatggatctgggaaaagtaacttctttcacgctatccagtttgtgtta
agtgatgaattctcacatctacgtccagaacagaggctgggtctgcttcacgagggtact
ggacccagagttatatccgcctttgttgagattatatttgacaattcagataacagaata
ccaattgagaaggatgaaattttcttgagacgagttataggatccaaaaaggatcaattt
ttcttgaacaaaaaggttgtaccacgctcggaggtattgaacctactggaaagcgcagga
ttatcaaattcaaatccatattatattgttaaacaaggaaagatcaatcaaatggcaatt
gctccagactctcacagacttaaactattgagagaagttgctggtacaagagtttatgat
gaaagacgggaagagtctgtgactattctaaaggaaactgttggaagggttgagaaaata
aatgaatacctgcaaacaattgaagaaagactaaagaccctggaagaagaaaaagaggag
ttgaaagaataccaaaaatgggataaagctcgacgtgttttggagttcattgtacatgac
acagaacatcgggagaataagagaaaactggaagaattgcaaaaggttcgtgcaaacagt
ggtaaggaacaacagcagtatgcagaccttgtaagggatgcccaggaacacgtgcgggag
tctaacaagaaattgaaggatgcgaggaaagatgtggcggcagccagggaagaaaaggac
atattgacaacagagcttcagcaactgttgagggagaaaactaaactggagatgggtatc
aaagatctcacggacgatgttgatggtgacaacaaatctaaggaaagagctgaggccgaa
ttagagcggttaagacaacaaatatcagaaaaagagagagaactagaagagttgaagcca
aaatacgaagaaatgagagcaagagaggaggaatgcactcgagccctggcattaaaccag
caaaagcgacaggagctgtatgctaagcaaggccgtggcacacagttcagatccaagcag
gacagggacaagtggattgagaaggaacttaaatcgttgagcaaacagataaaagacaaa
aaggaccacgagattaagcttcgcgatgacttgcggcgtgatgcttccaaactgacagag
ttggagaagcgaatagaggagctcacaaaggagatggaacggcagagagtggccatcgac
gagcacaacaagcagtactacgagtgcaagaagaggaaggatcaggagcagtgcaccaga
aatgagctgtggcgtaaggagactactcttacacaaaacctgtcttcgctcaaagaagat
ctagcaaaggctgatcaagcactacgatctatggcaggaaagcccattctgaacggtcgg
gacagtgtccgcaaggtgttggaaacattccaagagcgcggaggagagtgggccaatatc
gccacgcagtactacgggcccgtcatagagaactttacgtgcgacaagactatatacact
gcagtcgaggtgacggcaggcaacagattgttccaccacattgtggagtcagacactgtt
ggcacgaagattctgaaggagatgaaccgacagactctccctggggaagtcaccttcatg
ccgcttaacaggctgcaagtacgggacatgagctacccgaatgacaataatgccattgct
atggttcacaagctgaaatacgatcctaagtacgccaaggcgatgaagtacatcttcggc
aggactctgatatgccggaacttagagtgcgctaccgagctgggaaagcagtaccatcta
gattgcgtgacgttggagggcgaccaggtttcgtccaaaggttctctaactggtggttac
ttcaaccaatcgcggtctcgcctggagatgcagaagactaggtcggagctgatggagcaa
attaccacgctggaggaggagctcaaccaactacgagaagagctgaacaagactgagacc
aacatcaactctattgtctctgatatgcagagaactgaaacaaagcagggtaaagccaag
gacatcttcgacaaggtgaaggcagacattcgtctgatgaaggaagagttatcttctata
gaacgtttccgcggccccaaggagcgctcgctggcgcagtgtcactccagtctggaagct
atgcaagctacgaaggagggactcgaatctgaactacatcaggagctgatggagcaactg
tcgacagcggaccaagggaaagtcgatgagctgaacgacgctatacggcgcctcacgcag
gagaacaaggaggccttcagccagagaatgaacctcgaggccaataagaataagctggag
aacttgctcaccaacaacttgatacgccgtaaagaagaactggtccaagcactacaagag
atctcggtggaggatcgcaagcgtcggctacaaaacagcaagtcggacttgaacgcgtcg
gagaagcgcatcaaacagatcaacaaggagctagaggaggtcgagaagaaggtggtggcg
gccgtcaagaacgagaaggcactcaagatagagctggacaagtggagaaacaaggaaaaa
gaagcgcacgataaaatggcagaagacacaaaagacctcgagaagttggcttccaaggaa
gtgtttcttcaggagaaaattcaagagtccctggataagatagctgcactgggcacactc
cccaacgcgcccgatttgcacaccaaatatgagaaaatgtcgctcaagcagttatttaaa
gaattggagaaagccaatcaacacctgaagaaatataaccacgtcaacaagaaagccctg
gatcagtttatcagcttctccgagcagaaggagaagttgtacaagagaaaagaggagttg
gatattggcggcgagaaaattcgggagctgatagagacgctcgagcaccgcaagctggag
gccatccagttcacgttcaaacaagtcagcaagaacttcacggaggtgttcaagaagctg
gtgccgcagggccgcggatcgctcatcatgcgtgtggccgatgaactggatgtcaacccc
gaccgagcgaacgcggagcagttctgcggcgtcggcattcgggtgtctttcacgggcggc
gacggagacatgcgcgagatgaaccagctctccggcgggcagaagtcgttggttgcgctc
gcgcttatcttcgcgatccagaaatgcgaccccgcacccttctacctgttcgacgagatc
gatcaggcactggacgcgcagcatcgcaaggcgatcgcgaatatgatccacgaactgtcg
agcagcgcccagttcatcacgaccacgttccggcccgagctgctggagcacgcgcacaag
ttctacggcgtcaagttccgcaacaaggtgtcacacgtcgagtgtgtctcgctggcggag
gcgcgagacttcgtcgaggacagcgccacacacgcataa
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