Leptidea sinapis (Wood White): 126978736
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Entry
126978736 CDS
T09272
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126978736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126978736
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
126978736
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-GeneID:
126978736
NCBI-ProteinID:
XP_050683738
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Position
Z:complement(16845474..16861176)
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AA seq
613 aa
AA seq
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MSGVLKNYKMNSKSDGDDEKLSDVNTNVIDFIRLSMDNIKNSQVSNIHNAQSDSMEHSSQ
DTFVPCLTFKRRSNNLNAVHYPTPQVHVQRPQFKIPVDNSENFWIPKIAYKPNAEKPLEL
MTLYNKDGVPCGIEHPYKYELELYQPPKWALEPDKESHNFPRKLNETPLTFINTQSQLND
LLRHLETVTEFAVDLEHHSYRSYLGITCLMQITTNGGDFIIDPFAVSEHIHQLNQVFTNP
EILKIFHGAKHDIAWMQRDLGLYVVGMFDTQKAASILNKSRTTLQYIVFEYCHVELDKRF
QLADWRVRPIPEEMLEYARSDTHYLLYVWHEMKKELLKAGHGSTDKLLEVFENSKALCLN
RYEKPVVTDEKIIKSYEKTKKTFNARQLHALKYLYKWRDTQARELDESPEYLLPSHMLMA
LAEKLPRDIQGINACCNPMPPFVKQNTIELHNILKACRELPETAFAFLVEPASATPAPKK
PRLHRHKHINYKAKFNEMVRRWYESLNTHYNPALWPFMGLRRNPKIKTRSRQMASSRRMR
FSEPYHQFRSSGQKPRAQKSNNGVASMKESGEHATPSTSKAFAVPSSNDTDTSVKDCHQY
IHEYRKPERKMKK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagtcttaaaaaattataagatgaacagtaaatcagatggggatgatgaaaaa
ttatcggatgtaaatacaaatgtcattgatttcatacgtttaagtatggacaatattaag
aatagtcaagtttctaatattcataatgctcaatctgacagtatggaacattcttctcaa
gacacctttgtgccttgtttaactttcaaaagaaggagcaacaatttgaatgctgtgcat
tatccaactcctcaagtgcatgttcagaggccacagttcaaaatacctgtagacaattca
gagaatttttggatcccgaagatagcttataaacctaatgctgaaaaaccactagaactg
atgacactctataataaagatggagttccttgcggaatcgagcatccgtataagtatgag
ttggaattatatcagcctccaaaatgggcattggaacccgataaagaaagccacaatttt
ccgcggaaacttaacgagacgccgttgactttcatcaatacacaatctcagttaaatgac
ttattaaggcacttggaaacagttaccgaatttgctgtggaccttgaacatcattcctac
cgttcatatcttggtattacttgtttaatgcagataacaacaaatgggggagactttata
atagatccctttgctgtatcagagcatatacatcagctcaaccaagtatttactaatccc
gaaatactaaagatatttcacggagcgaaacacgacattgcatggatgcagcgtgatttg
gggctgtatgttgtgggaatgtttgatacacagaaggcggccagcattctcaataaatct
agaaccactctgcaatatattgtgtttgaatactgccatgttgaacttgataaaagattt
caacttgctgattggcgtgtgcgccccataccggaggaaatgttagaatacgcccgttca
gatactcattatctgctctatgtttggcatgaaatgaagaaggaacttttgaaagctggc
cacggctccacagataagctcttagaagtattcgaaaacagcaaggctttatgcttgaat
cgttacgagaaaccagtagtcacagacgagaagatcattaaatcatacgagaaaaccaag
aagacatttaatgctcgtcaactgcatgcgttgaagtatctttacaaatggcgcgatacg
caagcgcgggagttggatgaaagtccggaatatttgctgccaagtcacatgcttatggca
cttgctgagaaacttccacgtgatattcaaggaatcaacgcttgctgtaatccgatgccg
ccatttgtcaagcaaaatactatcgaattacataatattttgaaagcgtgccgtgaactg
cccgaaactgcattcgcatttctggtggagcccgcgagtgctacaccagcacctaagaag
ccgaggctacacagacacaaacacatcaactacaaagcgaaattcaatgaaatggtaagg
aggtggtacgagtcactgaacactcactataaccctgcactgtggccattcatgggattg
cgtagaaaccccaagataaagacacggtccagacagatggcgagttcaaggcgaatgaga
ttctcggagccgtatcatcaattcaggtcatctggtcaaaagccccgggcccaaaagagc
aacaatggtgtagcatcgatgaaagagagtggtgagcatgccaccccatcaacgagtaaa
gcgtttgctgtcccatcttccaatgatactgatacaagtgtcaaggactgccaccaatat
attcacgagtatcgtaaaccagaacggaaaatgaaaaaatga
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