Leptidea sinapis (Wood White): 126978845
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Entry
126978845 CDS
T09272
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126978845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126978845
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126978845
mRNA degradation factors
3'-5' decay
Pan complex
126978845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
126978845
NCBI-ProteinID:
XP_050683900
LinkDB
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Position
Z:complement(17424389..17464367)
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AA seq
727 aa
AA seq
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MDPQMYMQPPPLNTLPQESKLVAYRNHNNNTPSRALSDAFSSFRLSPVQGTSSVARNVFV
PEYPTNYYGPGTLLQQSNRSPPPVLTVNSQQVIQENVGGTTYFYQTNESVNPSGVHFSSS
TTVGALPTSDIGESERMGAAAGYSSQFQIQQALNIGSLSSEQGETECLGASTSFTPQLFQ
VPQAHNIGTMSSEQGEMDRFGNRAAYASQNFQFTEGQKFGSMSTEQGGTDRLGATSSFIP
QQLFQVPQTHNMAGGMSSEQGLIRTGPPYPAGVEPTVYYTWSVCSTPQGLRPMFYMPEAI
RAELFQRNEELYMHPNALVYPDLPENIEMYSELIPLETLSPHLIATSYKATHRQSSEYYA
IRRLHSYATKPCKRFDLWKNIDHPNVIRLNEYFTTKSFGDNSMVLVYDYHPGSVTLMNKY
LIGASNVNEASGAYHDPFSSDPDAPRPYSHQKNAMLRAVACGTLLPEAVIWSILVQLTAA
IRTVHTAGLACRTLDPTKVVMTGYRVRIAWCGVADALHPTDVDIYQAQQDDLTALGHLAL
YLACRTVHCENLVTSIELVNRTYSQDLKHLIVYLLSPQHRLVTDLMPMIGARFYTQIEAF
ERRADVFDNQMAKELDNGRLLRILFKFAFINERPEFNNDLQWAETGNRYLLKLFRDYMFH
AVSLDGRPWMDYAHIVYCLNQLDSGTSNKVDMLSRDGRSILVVTFAELKYCLEQTFDELM
NAAAPLL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatccccaaatgtatatgcagcctcctccgcttaatactttaccacaagaatcaaag
ctagttgcatatcggaatcacaataacaacaccccttctagggccttgagtgatgctttc
agcagcttcagactttcaccagttcaggggacttcttctgttgcaagaaatgtgttcgtg
ccagaatatccaacaaattattatggacctgggactctcctacagcaatcaaaccgatca
cctcccccagtgctgacagttaattctcagcaggttattcaggaaaacgttgggggaaca
acatatttctaccagactaatgaaagtgtcaacccatctggtgttcacttttcttcaagc
acaactgttggtgccttgccgacctcggatataggtgaatcggaacgtatgggggccgca
gccggttactcttctcaattccagatccaacaagcacttaatatagggagtttgtcgtct
gaacaaggtgaaaccgaatgtttgggggcttctactagtttcacaccacagctttttcaa
gtacctcaagcacacaatattggaacaatgtcctctgaacaaggtgaaatggatcgtttt
gggaatagagccgcttatgcatcacagaatttccaattcacagaaggtcaaaagttcgga
tctatgtcaactgaacaaggaggaacagaccgtctaggcgctacttcctctttcatacca
cagcagttgttccaagttccacaaacacacaatatggccggagggatgtcatctgaacaa
gggctaatccgtactggtccaccgtatcccgcgggtgtcgaaccaactgtttactacacc
tggagtgtatgcagcactccacaaggtttgcgaccaatgttctacatgccggaagcaata
agagcggagttattccaacggaatgaagaattatacatgcaccctaacgccctcgtatat
ccagatttaccggaaaatattgagatgtattctgagctaattcctctcgaaacgctatct
ccgcatttgatagcaacatcgtataaagcaacacacaggcagagtagcgagtattacgcc
attaggcgcttgcattcttacgccacaaagccatgcaaacgcttcgacttgtggaaaaat
attgatcatcccaatgtgatccgtctgaatgaatacttcacaactaaatcatttggagat
aactctatggtgttggtctacgactaccaccctggctcggtaacattgatgaacaaatat
ttgattggcgcaagtaacgtaaacgaagctagtggagcttaccacgaccccttctcatct
gatccagatgcaccacgtccttattcacatcagaaaaatgcaatgttacgtgcggtggcg
tgcggaactttgctacctgaggccgtgatctggagtattcttgtgcagttgacagccgct
ataagaactgtacacacggctggcttagcttgcagaactctagacccaacgaaggtggta
atgacaggctatagggttcgcatcgcgtggtgcggtgtcgcggacgctctacaccccact
gatgtcgatatttatcaggcccagcaggatgatctaacagccttaggacacctggcgctc
tacctggcttgtcgcacagttcactgtgagaaccttgtgacctctattgagcttgtcaat
agaacctattcgcaagatctgaaacacttaattgtgtacttactgtctccgcagcatcgc
ttggtaacagacctgatgccaatgattggagcaagattttatactcaaattgaggcattt
gaaaggcgtgccgacgtcttcgataaccaaatggcaaaggaattggacaatgggcgcctt
ctgaggattttattcaagtttgcgttcatcaacgaacgtcccgagtttaacaatgatcta
cagtgggcagagactggcaacaggtacttgcttaaactgttccgcgattacatgttccac
gcagtatcactcgatggtagaccatggatggactatgcacacattgtatattgcctaaac
cagctggatagcggtaccagcaacaaggtggatatgttgtctcgtgatgggaggagcata
cttgtggtcacatttgcggagctgaagtattgcctagagcaaacatttgatgaattgatg
aatgcggcagcacctttgctctag
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