Leptidea sinapis (Wood White): 126979166
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Entry
126979166 CDS
T09272
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126979166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126979166
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126979166
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126979166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
FYVE_2
Motif
Other DBs
NCBI-GeneID:
126979166
NCBI-ProteinID:
XP_050684370
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All DBs
Position
3:11022466..11124464
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AA seq
690 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSSWLISSIDALNLQIDLFESEVESLLVGKKKRLDKEKQDRMEELKMKLEKHRFHIK
KLETLLRMLDNMSVEVGQDYKSLLQIKRIKEDVEYYIGMSLERGLEDSEYIYDDIKGLDD
IELSGVGVPSSATTESNNSNDSPGSRTSILSGASPLTSPGLEPHNHTSDSVDIDKKKKEE
QVNKPVKPLALRAVSNTAPASPPTLNHSATNNSINSTGVSGTSTPNKQLPPAAPLSPHQR
VHNNSIEVLDNGPVTSTPTHASLHLAPHAPAPTSKSVSSTTLASAAASLATPAVTSSGVT
SPPPSSPPPPHLNGPLHNPIHNAHALNNGRVSETPSTPALSGVSMASGSSTGSGQLTSQL
TSPMPALPTSAEPLTATTASLKSIAQEAVHRAGLQTQNTRRGVPLSQALIPPILGVAPLG
PLPLNTDHQSQFTMMEAAFYHMPHASDSERMRVYLPKNICQTPAYYNQVLLPHSDTVEFF
QRLSTETLFFVFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGT
YIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaaggaaactgcaaggtgaaatagacaggtgtttaaaaaaggtgacagag
ggtgtggagacatttgaagacatctggcagaaagtacacaatgcaacaaatagtaaccag
aaagagaagtatgaggcggatcttaagaaggaaattaaaaaacttcagaggctacgagat
cagataaaatcatggatagcttctggagagataaaggataagagtactcttttagattat
aggaaactaatagaaactcaaatggagaggttcaaggtggtggaaagagaaacaaaaaca
aaagcatattcaaaagaaggtcttggagctgctcaaaaacttgaccctgcgcaaaaagag
agggaggagatgtcctcatggcttatttcttctatagatgcacttaatttacaaattgat
ctctttgaatcggaagtggagtcactattagttggtaagaagaagcgtttggacaaagaa
aagcaggacagaatggaggagcttaaaatgaaactcgaaaaacataggtttcatataaaa
aagttggaaacactgctaagaatgttagacaatatgtccgtcgaagttggccaggactat
aaatccctgttacagataaagagaataaaggaagatgtcgaatactatataggaatgtca
cttgaaagaggcttagaggacagtgaatatatctacgatgacattaagggactggacgat
attgagttgagtggagtcggtgtaccatcatcagcaacaacggagagcaataatagtaat
gattcacccggctctaggaccagcatactttcaggagcaagtcctctgacgtcaccagga
ctggaaccacacaatcacacatcagattctgtagatattgataagaaaaagaaggaagaa
caagtaaataaaccggtgaaacccctggcgttgcgagctgtgtctaacacggcgcccgcg
agtccaccaacgctcaaccactcggcaactaataatagtataaacagtacgggagtgtct
ggcacttccacgccgaacaaacagctacctccggccgctcccctatcaccgcatcagcga
gttcataacaacagcatagaggtgttggataatggtccggtcacgagcacgccgacacac
gcttcgctccatctggcgccgcacgcgcccgcccctacgtcaaaaagcgtctcgtcgacg
acgttggcgagcgcggccgcctcgctcgcgacgcccgcagtgacgtcatcaggcgtgacg
tcaccgccgccgtcatcgccgccgccgccacacctcaacgggccgctgcacaatccgata
cacaacgcgcacgcgcttaacaatggacgagttagcgaaacaccgagcacgccggcactg
agcggagtgagcatggcgagcggcagcagtacgggcagcgggcagttgacgtcacagctg
acgtcaccgatgccggcgctaccaaccagcgccgagcctctcaccgccaccacggcgtcg
cttaagagcatagcgcaggaagccgtgcacagagcgggactccaaacacagaacacaaga
cgaggtgtaccactgtctcaagctctcatcccaccgatattaggcgtcgcgccgttagga
cccttaccactcaatacggatcatcaatcgcagttcacaatgatggaggcagcattttac
catatgccacatgcatcagactccgagaggatgagagtgtatctgcctaagaatatctgt
caaacacctgcctattataatcaggtgctgttaccacactccgacacagtggaattcttt
cagcgtctttcgacagagacactgttctttgtgttttactacatggagggcacgaaggcg
cagtatctcgccgccaaggcactaaaaaagcagagttggaggtttcacaccaagtacatg
atgtggttccagaggcatgaggaaccgaaggttatcaatgaggagtacgaacagggcaca
tatatatactttgattatgagaaatggggccagaggaaaaaagagggcttcacatttgag
tacaagtacttagaagaccgcgacttgaactga
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