Leptidea sinapis (Wood White): 126979205
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Entry
126979205 CDS
T09272
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03250
Viral life cycle - HIV-1
lsin04144
Endocytosis
lsin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126979205
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126979205
04145 Phagosome
126979205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126979205
Membrane trafficking [BR:
lsin04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
126979205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hrs_helical
VHS
FYVE
Vps27_GAT-like
UIM
Motif
Other DBs
NCBI-GeneID:
126979205
NCBI-ProteinID:
XP_050684414
EnsemblRapid:
ENSLSNG00005023434
LinkDB
All DBs
Position
Z:complement(28776327..28806034)
Genome browser
AA seq
999 aa
AA seq
DB search
MFRANIFDKLLEKATCSLRLDPDWPSILQICDLIRQNDCSPKYAVAAVKKKLYSQNPHQA
MFALLTLESIVKNCGSGVHDEVTSKAFCEMLRDLVKTTAHENLKSKILELIQAWGFAFRN
NPKYRAVQDTVNILKAEGFKFPPLKESDAMFSADTAPEWADGEVCHRCRVAFSLMVRRHH
CRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDKASRPPSSTAKIESVDTSSEYGAA
QPQKRPGKSAEELQEEEELQLALALSQSEAEQKEKEKERRSRAFIAPEPVTHPTLSPTPS
SVSASPEHSTVGNPELSRYLDRNYWEQRLSRDSAAPTAPSSHGTNDASEDFAKPSTAKSQ
EDEAVDKEVDDFVETLKAQVEIFVNRMKSNSSRGRSIANDTSVQTLFMNITAMHSKLLKY
IQQQDDKRVYLESLQDKISQVRDSRAALDTLRAEHVHRLAQAAEAAERQRQMQMATKLQA
MRKKKHEYLQYQRQLALQRVQEQEREMQMRQEQQKHQYMMSSTGFYMPGVSMHQFQPGFP
TNQMMYTNPYHAQIPQTTDGSVSMPGQAQVSQANVPLNMNPMGSISVPQANTNFAMSTSG
VQLSQAPPTIQGPMSQQNMRPNMGQMPMQQQQMMMQMQQMRLQQPGVHQMMTQNMPNGPP
PQNASQQVPKQMPNQNQPNMMPPMTMAQPHQANPNNPMYNMSVPNMRMSIMQNQPNNPQI
PVSYPMNAQNPQASQQTASMPQMVHQSMPPHTMSMQNPTQQMPPGQQPQMTQHQSVPMPG
QPQFQNPQMMPHGQIPQNQLPNQGQNIHPTNMMPVSMPQQIHQGHMQNMHVQGPQNMQAQ
PPQNIQAQVAQNMQAQPQNTQAQVPQNMQAQVPQNMQAQSTQKMQTQATQNLGPQNMQTQ
GPQNIPATQNMPQGPQSLQNQQNMTHGMQQGQVPVQSNMRMPSNMQQQGQNPNMQGQMKA
QQNFANTQNQQPASNQTQTNQPQVKPEPNNNAAELISFD
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgggcgaatattttcgacaaattacttgaaaaagctacgtgtagtctacgtcta
gatcctgactggccatctattttgcaaatttgtgatttaataagacaaaacgattgttca
ccaaaatatgcagtggctgcagtgaagaagaaactttactctcaaaatccgcaccaggcc
atgtttgctttgcttactcttgaaagcattgtgaaaaattgtggttctggagttcatgat
gaggttacatcaaaggcattttgtgaaatgttaagggatttagtgaaaaccacagcacat
gaaaatttaaagagcaaaattcttgaattaattcaagcttgggggtttgcattcaggaac
aatccaaaatacagagctgtccaggatacagtgaacattttaaaagcagagggattcaaa
tttccgccactcaaagaatctgatgcaatgttttctgcagacacagctccggaatgggcc
gatggggaagtttgtcacaggtgccgtgtagctttttctctgatggtgcgacgtcatcac
tgtcgtgcctgcggacaggttttttgtcaacagtgcagctcaaaaacttcaaccttaccg
aagtttggaattgaaaaagaggttagagtctgtgatgcctgctttgataaagcaagccga
cctccatcttccactgctaagattgaaagtgttgatacctcaagtgaatatggtgcagcc
caacctcagaaacggcctgggaaatcggcggaggagcttcaggaggaagaagagttgcag
ctggcactcgcgctgagtcaatccgaggcagagcagaaggagaaagaaaaggagagacgg
tcacgtgctttcattgcaccagagcccgtcacacatcctacgttgtcgcccacgccgtct
tcagtgagcgcgtcacctgaacatagtactgtgggcaaccctgagctgtcgcggtatctg
gatcgcaactactgggagcagagactatcacgggacagtgccgcgcccaccgcgccctca
tctcatggcaccaacgatgcttccgaggatttcgcgaagccctcgacagcgaagtcccaa
gaggacgaggccgtagacaaagaggttgatgactttgtggagacactcaaggcacaagtt
gagatcttcgttaacaggatgaagagcaactcgtctcgtggtcgttcaattgcaaatgac
acgtccgttcagactctgttcatgaacatcaccgcgatgcactcgaaactcctcaagtac
atccaacagcaagacgacaaacgagtgtacttagaaagtttgcaggacaagataagtcaa
gtgcgtgacagtcgcgctgccctcgacacgctccgggctgaacacgtgcaccgtctcgca
caagcggcggaggcggcagagcgtcagagacagatgcaaatggcgaccaaactacaggcc
atgaggaagaagaagcacgagtatctgcagtatcagcggcaactggcgctccagagagta
caggaacaagagagagaaatgcaaatgcggcaagaacaacagaaacaccaatatatgatg
tcaagcactggattctacatgcctggtgtctctatgcatcaatttcaaccgggattccct
acaaaccagatgatgtatacaaacccctaccatgcccaaatccctcagactaccgacgga
tccgtatctatgcctggacaagctcaagtatctcaagccaacgtgccattaaatatgaac
ccgatgggctccatttctgtccctcaagccaataccaacttcgctatgtcaacatctgga
gtacaactttcgcaagcgcctccaacaatccaaggacctatgagtcaacagaatatgcga
ccaaacatgggtcagatgccaatgcagcaacagcaaatgatgatgcagatgcaacaaatg
cgcttacagcaaccaggagttcaccaaatgatgacccaaaacatgccgaatggacctccc
ccccaaaatgcaagccagcaagttcccaaacagatgccaaaccaaaaccaaccgaatatg
atgccaccaatgacaatggcacaacctcatcaagcgaacccgaataatcccatgtataac
atgtcagtgccgaatatgaggatgtcgataatgcaaaaccaacctaacaacccacaaata
ccagtttcatatccgatgaatgcgcagaatcctcaggcgagtcaacaaacagcgagtatg
ccacaaatggtgcaccagtcaatgcctcctcatacaatgtccatgcagaacccgactcag
cagatgccgccgggtcaacagcctcaaatgacacagcatcaatctgtgcctatgcctgga
caaccgcagtttcaaaacccgcaaatgatgccgcacggtcaaatacctcaaaatcagtta
ccaaatcaaggacaaaatatccacccaacaaatatgatgccggtatcaatgccgcagcag
atacatcaaggtcacatgcaaaatatgcatgtgcagggacctcagaatatgcaagcccag
cctccccagaacatacaggcacaagttgcccaaaatatgcaagcccagcctcagaatacg
caggcacaagtaccccaaaacatgcaggcgcaggtgcctcaaaatatgcaggcccaatct
acccaaaaaatgcagacacaagctacccaaaatctgggcccgcaaaatatgcaaacacaa
gggcctcaaaatataccagcaacccaaaatatgcctcaaggtccgcaaagcttgcagaat
caacaaaacatgacccacggaatgcagcaaggacaagttcctgtccagtctaacatgcga
atgccgtcaaatatgcagcaacaaggccagaatccaaatatgcaagggcaaatgaaagct
cagcaaaattttgcaaacacacaaaaccagcaaccagcgtctaaccaaacacagacaaat
cagccacaagttaaaccagagccaaacaacaatgccgcggaactgattagttttgactga
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