Leptidea sinapis (Wood White): 126979380
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Entry
126979380 CDS
T09272
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03030
DNA replication
lsin03410
Base excision repair
lsin03420
Nucleotide excision repair
lsin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126979380
03410 Base excision repair
126979380
03420 Nucleotide excision repair
126979380
03430 Mismatch repair
126979380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsin03032
]
126979380
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126979380
DNA replication proteins [BR:
lsin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126979380
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126979380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
RCF1-5-like_lid
AAA_30
AAA_5
AAA_14
AAA_33
AAA_16
BRCT_2
RuvB_N
AAA_19
AAA_17
AAA_6
RNA_helicase
AAA_18
Motif
Other DBs
NCBI-GeneID:
126979380
NCBI-ProteinID:
XP_050684593
LinkDB
All DBs
Position
3:6197164..6220508
Genome browser
AA seq
1053 aa
AA seq
DB search
MSRNIRSYFTVQKRETKVKEEDSDEIPESPDVQIVNKKKQSRKKRQIEDSDEEILTPKKK
KTDTTPQSKHQKSPKALKEVTITDLFGAGKIKKTEALVIKDKKGKKTETGIHSDDEFEKS
LLELDENKVQDLNKSQIESLSGKEKINDKSHEIENKSKKSHRNETDKEVVEEKKLDTIKS
NNKSNCGLDVLNNQEKSRDLKNKIHSDPRTEKKLDKLKLESKKTESSKNESKCNYSEFLS
NDDSKDSDDRKRKHNTSLNESVLSDEERYERKRHSAALYQKYLNRSGPKHLGAKEIPDGA
PDCLKDCAFLLTGVLDSFEREEVVAAITKYGGTIKNSVSKKVTHVLVGDDAGPAKTAKAQ
ELGIKIISEDDFLKMISESLIKKIKVEPKPNKDKTIKEVKKDANHVKSKLKEEKEEAKQN
NHDKLKSRKDTSIEKSKYFDKEKQSISNVKEEKVKIEKNDVVDKDEIHNDKIMNQSEDNQ
SKMSCGQDMTNQKNTSAPSLMWVDKYKPQSIKSIIGQQGEGSNVKKLINWLTKWYTNRKA
KLTKPNPWAKNDDGGYYKAALLSGPPGVGKTTTVSLVCKELGFDMVEFNASDTRSKTLIK
DQISELLTTTSLSGFARGATGKQAVTRKHVLVMDEVDGMAGNEDRGGLQELISLIKVSSV
PIICMCNDRNSEKMRSLVNYCYDLRFSRPRVDQIKAAMLSICFKEGVKISPDVMSQIVVS
ANQDVRQTLHLLSMWSADPNLMQSDNLRREADKLNKDIRMGPWEAIRKVFSEESHRSMSI
NDKSDLFFSDYSLVPLFVHENYLNVAPHCPKNEVLDRMSRAADSISQGDLVDKRIRSQQA
WSLLPLQAMYSSVIPGSVLSGHVAAQIQFPGWLGRNSRASKMARLAQQIHAHTRLTTSGS
KSSIHLDYAHHLRDAILNPLIADKMEGIEKSLAVLEAYHLLREDLDSLTELSLWPGQRNP
NVLIDSKVKAAMTRTYNKQASALPYAPGAVKKTKHTQHEGDEEAQTYDDDDEEMEHDSDP
ENDALIKKKKLKHIEKTSSKEKPKQPIKGKKKK
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggaatatccgttcatatttcactgttcaaaaacgtgagacaaaagtgaaggaa
gaagacagtgatgaaataccagaatcaccagatgttcaaattgttaataagaaaaagcag
tctcgaaagaaacgacaaattgaagattctgatgaagagatattaacacctaaaaagaaa
aaaactgataccacaccacaatcaaaacaccaaaaaagtcccaaagctttaaaggaagtg
acaattacagatttatttggtgctggaaaaatcaaaaaaaccgaagctttagttataaaa
gacaagaaagggaagaaaactgaaactggaatacactcagatgatgaatttgaaaagagt
ttattagaattagatgaaaataaggtacaagatttaaataaatcacaaatagaaagttta
tcaggaaaagaaaaaataaatgataaatcacatgaaatagaaaataagtcgaagaaatct
catagaaatgaaactgacaaagaagtagtagaagagaaaaaactagatactattaaaagt
aacaataaaagtaattgtggcttagatgtattgaataatcaggagaaatctagagattta
aaaaataaaattcacagtgatcctagaacagaaaaaaaattagacaagcttaaactggaa
agtaagaaaactgaatcaagtaaaaatgaatctaaatgcaattacagcgagttccttagc
aatgatgacagcaaagatagtgatgacagaaaaagaaaacataatacaagtctaaatgaa
tctgtactaagtgatgaggaaagatatgaaagaaaaagacattcagcagccttatatcag
aaatatttgaacagatcaggacctaaacatttgggtgcaaaagaaataccagatggtgca
cctgattgccttaaagattgtgcattccttctcactggtgttttggattcctttgaaaga
gaagaggtggtggcagctattacaaagtatggtggcaccatcaaaaattctgtcagtaaa
aaggtaacacatgttcttgtgggtgatgatgctggaccagccaaaactgcgaaagctcaa
gaacttggtataaaaattataagtgaagatgactttttaaaaatgatcagtgaatctctc
atcaaaaaaatcaaagttgaaccaaaaccaaataaagacaaaactataaaagaagttaag
aaagacgctaatcatgttaaatcaaaactaaaagaagagaaagaagaagcgaaacaaaat
aatcatgataaattaaaaagtagaaaagatacaagtattgagaaatcaaagtattttgac
aaagaaaaacaaagtattagtaatgttaaagaagaaaaagttaaaattgaaaagaatgat
gtcgttgataaagatgaaattcacaatgataaaatcatgaatcaaagtgaagataatcaa
agcaaaatgtcatgtggacaggacatgacaaaccagaaaaatacatcagcaccatcactg
atgtgggttgataaatataaaccacagagcataaagagtataataggacagcagggtgaa
ggtagcaatgtcaagaaattaattaattggctcacaaaatggtacacaaacagaaaggca
aaattgacgaaaccaaacccttgggcgaagaatgatgatggtggatattataaagcagct
ctcttgtctggacctccgggagttggtaaaacaacgactgtgtccctggtatgtaaggag
ctcggattcgacatggtagagttcaatgcatcggacactcgcagcaagacattgattaag
gaccaaatatcagaattgctcaccactacatctctatcaggtttcgcgagaggtgcaaca
ggcaaacaagctgtgaccaggaaacatgtgcttgtaatggacgaggttgatggcatggcc
ggcaatgaggacagaggtggtcttcaagagttgatatcattgatcaaggtgtcatcggtg
ccgatcatatgtatgtgcaatgacaggaacagtgagaaaatgaggagtcttgtcaactat
tgctatgatttgagattctccaggccgagggtcgatcagatcaaggcagcaatgttgtct
atatgtttcaaagagggtgtcaagatatctcccgatgtgatgagccagatcgtggtgtca
gccaatcaggatgtgcggcagaccttgcatctactgagcatgtggagtgctgatcctaat
ctcatgcagtcagacaaccttcgaagagaggccgataaactgaacaaagatatccggatg
ggcccgtgggaggcgatccgtaaggtgttctccgaggagtctcaccgcagcatgagcatc
aacgacaagagcgacctgttcttcagcgactacagcctggtgccgctgttcgtacacgag
aactacctcaacgtggcgccgcactgccccaaaaatgaagtgttggaccggatgagtcga
gcagcggacagtataagtcagggagacttggttgacaagcggatacgatcccaacaagcc
tggagcttgttgccattgcaggcgatgtacagttcggtgatccctggcagcgtactatca
ggtcacgtggcggctcagattcagttcccgggctggctcggtcgcaactcgcgcgcctcc
aagatggcgcgactggcgcagcagatacacgcgcacaccaggcttaccacatctggttca
aagtcttcaatccacctggactatgcgcaccacctcagagatgcaatcctcaacccgctg
attgcggacaagatggaaggcatcgagaagtcgttggctgtgctcgaggcttatcatctg
ctgagagaagacctggactcactcaccgagttgtccctgtggccgggacagagaaaccct
aatgtgctcattgattccaaggtaaaagcggcaatgacccgcacatacaacaagcaagct
agtgcattgccgtatgctcctggtgctgtaaagaaaaccaagcacacccaacatgagggt
gatgaagaagctcagacctatgatgacgatgacgaagagatggagcatgacagcgaccca
gaaaatgatgctctcatcaagaaaaagaaattaaaacacattgaaaagacatcaagtaaa
gaaaagccaaaacagccaattaaaggaaagaaaaagaaataa
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