Leptidea sinapis (Wood White): 126979523
Help
Entry
126979523 CDS
T09272
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsin03009
]
126979523
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126979523
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
90S particles
Helicases
126979523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-GeneID:
126979523
NCBI-ProteinID:
XP_050684806
LinkDB
All DBs
Position
3:12184669..12209083
Genome browser
AA seq
607 aa
AA seq
DB search
MDAYDIFKKLTKGLTFKHRVLGVKNNDYKIKPMLKNEDIKNDIDLKRIEDEIELKQEIES
NDSGSQTESHASEESEDELQILEGVRIEKKKDKTKKKSKLDPEKLKKKLELEEHNRFRNE
HGIKVVGRHVPCALKDFNELVSRYNVSKALVDTVVQCGYTEPTPIQRQALPCLLEGRQIV
ATAPTGSGKTAAFLLPLFHILGAPQGGPRALVLCPTRELAHQIYREALRLSASTQLRCSV
VKSVKQSKVKERESTIRKSDVIISTPNRLCYLLNQDNVGISLDKVQWLIVDEADKMFEGS
VEEVDTFRQQLDVITRACSAKLAMFSATHTPALAKWARHNMRGLINLTVGHRNAAASSVQ
QELVFCGNESGKLLAFRQLVQRGLRPPVLVFVQSKDRAKQLFKELLYDGINVDVIHADRT
QAQRDNVVRSFRVGRIWVLICTELMGRGMDFRGVNLVINYDFPPSAIAYIHRVGRAGRAG
ATGRAVTFFTQDDVANLRSIASVMRQSGCAVPEYMLAMKQDPNKRKQLMKRALRRDKIST
VLEKPDKRKLDKETPDSEKAKTTEEVKSGKNKKLRRIENNNKEGKKSKKQLEKGKKIMKK
KKKPKNK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatatgatatttttaaaaagttaactaaaggcttgacgttcaaacatcgcgta
ttaggtgttaaaaataatgactataaaattaagcccatgctgaagaatgaagacataaaa
aatgatatagacttgaagaggattgaagatgaaattgaattaaaacaagaaattgaatct
aatgactcaggatctcaaactgaatcacatgcatctgaagaatccgaggatgagttacaa
atactagaaggtgtgagaattgaaaagaaaaaagacaaaacgaagaagaaatcaaaactt
gatccggagaaattgaaaaaaaaattagagctagaagagcataatcgtttccgcaacgaa
catggaattaaggttgtagggcgtcatgtaccatgcgccttgaaggacttcaatgagttg
gtttccagatataatgtttctaaagctcttgttgatactgttgtacaatgtggatacacg
gaacccacaccaatacagaggcaggctctgccatgtctgttggagggtcgtcagatagtg
gccacagcccccactggttcaggaaagacagcagcatttttactgcctctgtttcacata
ctcggagcacctcaaggtggacctagagccttagttctctgccctaccagggagctggcc
catcagatatacagagaggcccttagactatcagccagcacacaactcagatgtagtgtt
gttaaaagtgtcaaacaaagcaaagtcaaggagagagagtcgacaattaggaaaagtgat
gtaattataagtacaccaaaccgtctctgttatctgctgaatcaagacaatgttggcatt
tcactagataaagttcaatggctgatagtggacgaagcggacaagatgttcgagggttcg
gtggaggaggtagacacgttccgccaacagctagacgtgatcactcgcgcgtgttcggcc
aaactggccatgtttagtgccacacacactccggcactcgctaagtgggcgcgacacaac
atgcggggtttgatcaacctcaccgtaggccatcgaaatgcagcagcgagcagtgtccag
caggagctggtgttctgcggcaacgagagtggcaagctcctggccttccggcagttggtg
cagcgaggtctgaggccgccggtgctagttttcgtccagagcaaggacagagccaagcag
ttgttcaaggagctgctgtacgatggtatcaatgtggacgtcattcacgcggacagaacg
caggcacagcgagacaacgtggtgcgcagtttccgcgtgggtcgcatctgggtgctgatc
tgcacggagctgatggggcgtgggatggacttccgcggtgtcaacctcgtcatcaactac
gatttcccaccgtccgctatcgcctacatacacagggtggggagagcgggtcgtgcggga
gcgacgggaagggcggtcacattcttcacgcaggatgacgtcgctaacttgaggagcata
gcgtctgtgatgaggcagtccgggtgcgccgtgcccgagtacatgctggccatgaagcag
gaccccaacaagaggaagcagctgatgaagagagctctgcgcagagacaagatctccact
gtgctggagaaaccggataaaagaaagctagacaaagaaactcccgattccgagaaagcg
aaaacaacggaggaagttaaaagcggcaaaaataagaaattaagaagaatagagaataat
aataaggaaggaaagaagagtaagaaacaattagagaagggaaagaagatcatgaagaag
aaaaagaaacctaaaaataaatag
DBGET
integrated database retrieval system
