Leptidea sinapis (Wood White): 126979568
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Entry
126979568 CDS
T09272
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03022
Basal transcription factors
lsin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126979568
09124 Replication and repair
03420 Nucleotide excision repair
126979568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126979568
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126979568
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126979568
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126979568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
126979568
NCBI-ProteinID:
XP_050684895
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All DBs
Position
3:13921608..13939394
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AA seq
291 aa
AA seq
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MADDESPSDSSVLAIIIDTNPNQRYITEDPKILTGCLDAVIAFANSHLMQKTRNQLALIG
CHFHKSEFLYPSPGKPLDVRQIDGQYELFTLVEKTVKMRLVNLIKSQPQEEKPGESLLAG
ALAMALCFIARMRREAGVGARISSRILIVTGSSDTAAQYINYMNVFFTAQKQQVLIDVCS
LDKHLSLLQQGCDITGGLYLKVPSLEGLLQYLLWVFLPDVSERKQLVLPGRGRVDYRAAC
FCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVFKIGGPLPIKPKKKKTRV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatgaatctccttcagacagtagtgtgctggcgataattattgatacaaac
ccaaatcaacgctatattactgaagaccctaaaatactaacaggatgcttagatgcagta
attgcttttgccaattcacatttgatgcagaaaactagaaatcaattggcacttataggt
tgtcacttccataaaagtgaattcctgtacccatcaccagggaaaccactagatgtacga
caaattgatggacaatatgaattgtttacattagttgagaaaacagtgaaaatgagatta
gtaaatttaataaaaagtcaaccacaagaagagaaaccaggtgaatctctattggcgggc
gccttagcaatggcactctgttttattgcaagaatgcgtcgtgaagcaggtgtgggcgct
agaattagtagtcggattttaatagttaccggaagttcggacaccgccgcccagtatatc
aactatatgaacgttttctttacagctcagaaacagcaagtgctaatagacgtgtgttcg
ttggacaaacacctcagcctgttgcagcaaggttgcgatatcactgggggactatattta
aaagtaccctcgcttgaaggcctcctgcaatatttactgtgggtatttcttccggatgtg
tccgagcggaaacagttagtgttgcccgggcggggtcgtgttgattaccgggccgcgtgc
ttctgccatcgtgagttactcaccatcggatatgtgtgttctgtctgccttagtgtattt
tgcaaattcagcccaatctgcacaacatgccatacggtgttcaaaatcggcggacctctt
cctattaagccaaagaaaaagaagactagagtgtag
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