Leptidea sinapis (Wood White): 126979694
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Entry
126979694 CDS
T09272
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03420
Nucleotide excision repair
lsin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126979694
09124 Replication and repair
03420 Nucleotide excision repair
126979694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsin04121
]
126979694
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126979694
Ubiquitin system [BR:
lsin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
126979694
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
126979694
TCR (transcription coupled repair) factors
Cul4-CSA complex
126979694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
126979694
NCBI-ProteinID:
XP_050685105
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Position
4:9289820..9344078
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AA seq
1130 aa
AA seq
DB search
MAYHYVVTAQKPTAVTACITGNFTSPTDLNLLVAKVSRLEMYLVTPEGLHPMKEVGLYGR
VAKMKLFRPPYESKDLVFILTARYNAMILEWRTGPDGELEVVTRAHGNVSDRIGKPSENG
ILTVIDPQARVIGLRLYDGLFKIIPLDKDSTELKAATLRLEELNVYDLEFLHGCANPTLI
LIHQDLNGRHIKTHEINLRDKEFMKIPWKQDNVETEASILIPVPSPLGGAIVIGQESIVY
HDGQSYVAVAPPQIKLTPINCYCRVDTKGLRYLLGDISGRLFMLLLELHERVDDVQAVKD
LKVELLGEIPIPECMTYLDNGVVFIGSRLGDSALVRLSAARDEAAHYVKVMESFTSLAPI
VDMCVVDLERQGQNQLITCCGAYKMGSLRIIRNGIGIQEQASIDLAGIKGMWALTLESNS
TFHDTLVLAFVGQSRVLTLSGEEVEETDIKGFVSDKQTFFTGNVCHDQIIQVTDEGVRLI
GRGPGGWGQTAEWVVGGRRAISVVASSETRVVVAAGNVVFLLAIRQAALDLITQVCMEEE
VACLDLGPGDEDALLGVGLWTDISIRVLRLPDLTPLHTEKLGGEIIPRSLLISVLEDVWY
LLCALGDGSMFYFTLDPATGLLTNRKKVTLGTQPTVLRSFRSLSTTNIFACSDRPTVIFS
SNHKLVFSNVNLKEVTHMCSLNAQAYPDSLALATDSTVTIGTIDEIQKLHIRSVPLGETP
RRIAYQEASQTFGVITMRADKPEWAGGSATRGTSASTAAASTSGAPAAAKHAPSVFDLEI
HNLLVLDQHTFEVLHAHQLGAGEFAMSLVSCRLADDPAHYYVVGTAILNPEESEPKQGRI
LLFHWSEGKLTQVAEKEIKGGCYTLVEFNGKLLASINSTVRLFEWTSEKELRLECSHFNN
IVALYLKVKGDFILVGDLMRSMSLLQYKQMEGSFEEIARDYTPNWMTAVEILDDDTFLGA
ENSFNLIVCQKDSAATTDEERQQMSYMGQFHIGDMVNVMRLGSLVGQHADTAAPVSKPAL
LATVSGAICLVVQLSQDLFDFLHQLEERLTHTIKSVGKIPHSFWRSFNTDIKTEPVEGFV
DGDLIESFLDLSRDKQEETVQGLQIEEGGSMRDATVDDLIKIVEDLTRIH
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccactatgtagtaacagctcaaaaacctacagcggttacagcatgtataaca
ggaaactttacttcacctaccgatttaaatttgctggttgcaaaggtatcacggctagaa
atgtatttggtgactcctgagggcttgcatccaatgaaagaagtgggactatatggaaga
gttgccaaaatgaaactattcaggcctccgtatgagagcaaagatttagtgtttatatta
acggcacgctacaatgctatgatactagagtggagaactgggccagacggtgaactagaa
gtggtaaccagagctcatgggaatgtatcagacaggattggcaaaccctccgagaatggc
atattgacagtaattgacccacaagcaagagttataggcctgaggctttatgatggactc
ttcaagattatacctcttgataaagactctactgaattaaaagcagctacattaaggttg
gaagagttaaatgtttatgatttggaatttttacatggttgtgccaatcccacattaatt
ttaatacatcaggatctcaatggaaggcatataaaaacacatgaaataaatttgagagat
aaagagtttatgaagataccctggaaacaagacaatgtggaaacggaagcctcaatactt
ataccagttcctagtcctttaggtggtgctatcgtaattggacaagaatctattgtatat
catgatgggcagagttatgtggctgttgcgccgccacaaataaagctcactccaataaac
tgctactgccgagttgacactaaaggcctccggtacttacttggtgacatatcaggcaga
ctcttcatgttgctgctagaattacatgaaagagttgatgacgtccaggctgtaaaggat
ctgaaggtggaactgttgggggaaatcccgatacccgaatgtatgacatacctggacaac
ggtgtggtgttcattggctcgaggttgggtgactccgccctggtgcggctgtcggcggcg
cgagacgaggccgcgcactacgtaaaggtgatggagagcttcaccagcctcgcgcccatc
gtcgacatgtgcgtcgtggacctggagcggcaagggcagaaccagctcatcacgtgctgt
ggcgcatacaaaatgggttcgctccgcataatacgaaatggtatcggcatccaagaacaa
gccagcatagacctcgctggtatcaaaggcatgtgggcccttaccttggagagcaattct
accttccatgacacactggtgctagcctttgtggggcagagcagagtattgacactcagc
ggtgaggaagtagaggagacagatatcaaaggatttgtttcggacaagcagactttcttc
acaggcaatgtttgtcatgatcagattatacaggtgacagacgagggcgtccggctgatc
ggtcgcggccccggcggctgggggcagacggccgagtgggtcgtcggtgggcgacgagcc
atctccgtggtggcgagctcggagacgcgcgtggtggtggccgcggggaacgtcgtgttc
ctgctggccatcaggcaggccgcgctcgacctcatcacacaggtgtgcatggaagaggag
gtggcttgtctggacctgggtcccggagacgaagacgcgcttctgggcgttgggctgtgg
actgacatatctatcagagtactgaggttgcccgatctcactcctctgcacaccgagaag
ttaggaggggagataatcccgcggtcgctgctcatcagcgtgctggaggacgtgtggtac
ctgctgtgcgcgctgggcgacggctccatgttctacttcacgctggaccccgccaccggc
ctgctcaccaaccgcaagaaggttacacttggaacacagcctacagttctacggagcttc
aggtcactgtccacaaccaacatcttcgcgtgctcggaccggcccacggtcatcttctcg
tccaaccacaagctggtgttctccaacgtgaacctcaaggaggtgacgcacatgtgctcg
ctgaacgcgcaggcctaccccgacagtttggcgttggccacggacagcacggtcaccatc
ggcaccatcgacgagatacagaagctgcacatccgcagcgtgcccctgggagagaccccg
aggaggatcgcttatcaagaggcctcacagactttcggcgtgatcacgatgcgtgcggac
aagccggagtgggcgggcgggagcgcgacccgtggcacctccgcgtccacggccgccgcc
agcaccagcggcgcgccggcggcggccaagcacgcgccgtccgtgttcgacctggagata
cacaacctgctggtgctggaccagcacaccttcgaggtgctgcacgcgcaccagctgggc
gcgggcgagttcgccatgtcgctggtgtcgtgccgcctggccgacgaccccgcacactac
tacgtggtgggcacggccatcctcaacccggaggagtccgagcccaagcagggtcgtata
ttattgttccattggtcagaaggaaagctgacgcaagttgcggagaaggaaataaagggc
ggctgttacacccttgtggagtttaacgggaaattgctcgcttctatcaacagcactgtg
agactgtttgagtggacgtcagaaaaagagctgcgtctcgagtgtagccacttcaataac
atcgtggcgctctacctcaaggtgaaaggagatttcattctggtgggcgacctgatgcgc
tccatgtcgctgttgcagtacaaacagatggaaggtagcttcgaggagatagcgagggac
tacactcccaactggatgacggcggtggagatcctcgacgatgacacattcctcggagca
gagaacagctttaatctgatcgtatgccagaaagacagcgcggcgacgacggatgaggag
agacaacaaatgagttacatgggccagttccacatcggcgacatggtgaacgtgatgcgg
ctggggtcgctggtggggcagcacgcggacaccgccgcgcccgtctccaagccggcgctg
ctggctaccgtcagcggcgctatatgtctagtagtacagctatcgcaagacctgtttgac
ttccttcaccaactcgaggagcgactgacccacacgattaagtccgtcggcaagatccca
cactcgttctggcgctccttcaacacggacatcaagacggagccggtagagggcttcgtg
gacggtgacctcatcgagagctttctggatctcagcagagacaagcaagaagagactgtg
caagggttacagatagaggaaggcggtagtatgcgggacgcgaccgtcgacgacctcatc
aagatagtggaggatctcacgcggatacactga
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