Leptidea sinapis (Wood White): 126979807
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Entry
126979807 CDS
T09272
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126979807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsin03041
]
126979807
03110 Chaperones and folding catalysts [BR:
lsin03110
]
126979807
04121 Ubiquitin system [BR:
lsin04121
]
126979807
Enzymes [BR:
lsin01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
126979807
Spliceosome [BR:
lsin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
126979807
Complex C
U4/U6.U5 tri-SnRNP related factors
126979807
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
126979807
Chaperones and folding catalysts [BR:
lsin03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
126979807
Ubiquitin system [BR:
lsin04121
]
Ubiquitin ligases (E3)
U-box type E3
126979807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
126979807
NCBI-ProteinID:
XP_050685350
LinkDB
All DBs
Position
1:complement(32014128..32017966)
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AA seq
516 aa
AA seq
DB search
MGKRQHQKDKMYLTYTEWTTLYGGKRSGTAVEEDTTFKRLPFDHCCLCLQPFDQAYCDGD
GNIFELQAIIDFIKKYKINPVTGKKIDVKGLVKLNFFKNANDDYHCPVLFKPFTKNSHIV
AIKTSGNVYCYEAVEQLNIKGKNWKDLINDTAFTRSDIITIQDPNNLAKFNISTFHHVKN
NLRVETEEEIAMKKDPHARLKSVFAETKDILQELEREYKAPEVKENKKEVADKFNAAHYS
TGMVAASFTSTAMVPETKHEAAIICEDEVKYERVKKKGYVRLVTNFGQLNFELYCDVVPK
TCHNFIKHSNDGYYNGTKFHRSIKNFMIQGGDPTGSGLGGESIWKKPFEDEIKPNLHHTG
RGILSMANSGPNTNGSQFFITFRSCKQLDGKHTIFGKLVGGMDTLNLMEQIEVDNKDRPV
HDIIIEAAQVFVDPFAEAEEQLLAERAEELKKQAEAESKGVKPKKANNQPLKVFRDGVGK
YLNLQELTNNKTTNKEVPAKKVKKDTKSGFGSFESW
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacgtcagcatcaaaaagataagatgtaccttacgtacactgaatggactaca
ttgtatggtggaaaacgatctggtacagctgttgaggaagacacaacattcaaaagacta
ccttttgaccattgttgcctatgtttacaaccatttgatcaagcttactgcgacggtgat
gggaacatttttgaattgcaagctatcattgactttataaagaaatataaaattaaccct
gtcactggaaaaaaaatagacgtaaaaggattggttaagttaaatttctttaaaaatgca
aacgatgattatcactgcccagttctctttaaaccatttaccaaaaattctcatattgtt
gcaattaagacaagtggcaatgtatattgttatgaggcagtggagcaactcaatattaaa
ggcaagaattggaaggacctcattaatgacactgcatttacaagatctgacataattacc
atacaagatccaaacaatctagccaaattcaatatttctacatttcatcatgtaaaaaac
aatctgagagtggaaactgaagaggaaatcgctatgaagaaagatccacatgcaagatta
aaatctgtgtttgcagaaacaaaagatatcttacaagagttagagagggaatacaaagca
cctgaagtgaaagaaaataaaaaagaggtagcagacaaattcaatgcagcacattactct
acaggaatggtagctgcaagctttacatcaactgctatggtgccagagacaaaacatgaa
gctgctattatttgtgaagatgaagtgaagtatgaaagagttaagaaaaaagggtatgtt
agattagtgactaacttcggtcagctgaattttgagttatattgtgatgttgtaccaaaa
acatgtcataatttcattaaacacagcaatgacggatactataatggtacaaaattccac
agatctatcaaaaactttatgattcaaggaggtgatccaactggttcggggcttggtggt
gaatcaatttggaaaaagccctttgaagatgaaataaaacctaatttgcatcatacaggc
agaggaatcctatctatggcaaattcagggcccaacactaatggatctcagttttttatt
acattccgctcttgcaaacaactggatggcaagcatacaatatttgggaaactggttggt
ggcatggatacactcaacttgatggagcaaattgaagtagataacaaggataggccagta
catgacatcattattgaagcggcccaagtatttgttgatccatttgcagaggctgaggag
cagttattagctgaaagagctgaagagttaaaaaagcaagcagaggcagaaagtaaaggt
gttaaacccaagaaagcaaacaatcagccattaaaagtgtttagggatggtgtcggaaag
tatcttaatttacaagagctaacaaataataaaactaccaacaaagaggtgccagctaaa
aaagttaaaaaagataccaaatcaggctttggttcatttgaaagttggtag
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