Leptidea sinapis (Wood White): 126979824
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Entry
126979824 CDS
T09272
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126979824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126979824
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126979824
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
126979824
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Ntox10
Motif
Other DBs
NCBI-GeneID:
126979824
NCBI-ProteinID:
XP_050685341
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All DBs
Position
4:6820285..6822914
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AA seq
219 aa
AA seq
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MMDKEYSCEYGKICVPGMKLCELNEKNVSGPGTYDLGGTIFASLAGVLKLEKDESTQVTT
VSVESFKTPSILPKSGDIVTARVTVVNPRMVQCQILCVGPSVLARQYKGILKKEDIRVID
RDRIDPYKCFRPGDIILARVLPMTEMHWYHITTAENELGVVIATAEGSPQGISMVPISWS
EMQCPKTLVKEPRKVARVVPDKVNLDLLNSTIKASENNK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatggataaagaatattcatgtgaatatggaaaaatttgtgtacctggtatgaaactt
tgtgaattgaatgaaaaaaacgtttctggaccgggaacatatgatttggggggaacgata
tttgcatcattagcgggtgttttaaaattagaaaaagatgaatctacacaggttacaact
gtatcagtagaaagctttaagacacctagtatattacccaaatctggtgacattgtaaca
gctagggtgacagtggtgaatccaaggatggtgcaatgccaaatactttgtgtagggcca
tcggtgctagccaggcaatataaaggaattctcaaaaaagaagacatcagggttatagac
agagatagaatagatccatacaagtgtttcaggcctggtgatattatattggctcgagtt
ttgccaatgacagaaatgcattggtatcacataacaacagctgagaatgaattgggagtt
gttatagctacagcggaaggttcaccgcaaggaatcagtatggtaccaatcagttggtca
gaaatgcagtgtcctaaaactcttgtcaaggagcccaggaaggtagcaagagttgttcct
gataaagtaaacctagacctattaaattctactataaaagcaagtgaaaacaataaataa
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