Leptidea sinapis (Wood White): 126979878
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Entry
126979878 CDS
T09272
Name
(RefSeq) zinc finger protein ush isoform X1
KO
K17441
zinc finger protein ZFPM1
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsin03000
]
126979878
Transcription factors [BR:
lsin03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
126979878
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_5
zf-C2H2_4
zf-met
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
zf-C2H2_3rep
zf-C2H2_REST
zf-C2HE
Zf-C2H2_ZNF451_C
zf-C2H2_2nd_ZNF462
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
126979878
NCBI-ProteinID:
XP_050685401
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Position
4:complement(12653234..12942181)
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AA seq
795 aa
AA seq
DB search
MLLWLSYLKQLELACANVAELPRGGAFNFKTMCEDEEWGNENEAMPGEPRTPSSGGERAS
SGAASPTSGSSPAASPPRLRLNTSLATDPALAPQATLLKRESPSPSPPPPATQQPKDFIP
ITVNNFPALFPTVAPPGYTCTPCGIRYSSLSTLQAHQQHYCSKRKTKAENNDSSTEQAAD
DSSGDAKCSRPPEASRKQYACTYCSYSADKKVSLNRHMRMHSSSPLSSGTPVPAPTSNGE
ATESSPTQDRHCVDCDIHFSSVKTYRAHKDYYCNTRQVVKPALAARTGSVTSGSAPPSPG
TSPPAQNQYALALPTNPILIVPYSLFRSASTLPGTTLPDPDTPCFLLPNGTFQPISRALA
NSNTEGKEAEVLKSANRPREPSRDTTTPLDLSVRRTPESVTTDEHEKENRLRSTTPEQIV
CAPSLPGSPATPSPSRRSSSPSGESSPKRRRRNSRDPTPKPLIPSPHDDKFSGLVPQSII
PPALALRLATELPVTTSSPQVLVKQGVSKCKECNIVFYKYENYRIHKRNYCSARGGEERA
SPAPPEPGPPPQYRQLICLACGIHFSSLDNLTTHQSFYCTKRDTRSPRSLPEVARPASNS
EGGWKCPCCDVVSPTAAAAQRHVEGHGAVKAFRCTICRYRGNTLRGMRTHIRMHFRDKPA
DLQEESFISCVVEDDSREASSPSPAGGERVHRCGSCAYTSTYRGNVVRHARLVHAADDPE
PERMSPAPAPVAPPALVKKEPELDEETPNYCKSCNISFKYVNTYKAHKQFYCTAANQDAA
ANNNLPARVTDTPVV
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgttattgtggttgagttacttgaaacagctggagctggcgtgcgctaatgtggctgag
ttgccgagaggtggcgctttcaacttcaaaacaatgtgtgaggacgaggaatggggaaac
gagaacgaggcgatgccgggagaacctcgcacgccgagttcagggggcgagcgagcgtcg
agcggcgccgcttctcctacttcggggagttctcccgctgcctcgcctccgcgcctgcgg
ctgaataccagcctggctaccgacccggcgcttgcaccacaagcgacgttactgaagcgt
gaatcgccatccccttcgccgccgccaccggcaacacaacagccgaaagactttataccg
attaccgtaaataacttcccagctttattccctactgttgccccgccgggctatacgtgc
acaccctgcggtataagatactcttctctgagcacactccaagctcatcagcaacattac
tgctccaaacgaaaaactaaggccgaaaacaacgactcttctacggagcaagcggctgac
gattcaagtggcgatgctaaatgttcaagacctccagaagcctcaagaaaacaatacgcg
tgtacatactgttcctatagtgctgataaaaaagttagtttaaatcgtcacatgcgaatg
cattcatcgtcaccattaagcagtggaacgcccgtaccagcacctacctcaaatggtgaa
gcaacagagagctctccaacccaagacagacactgcgtcgactgcgacattcactttagt
tcggtaaaaacgtaccgcgcacacaaagactactactgcaacactaggcaagttgtcaag
ccagcattggctgctagaacaggttcagtaacttcaggctccgcccctccatcaccagga
actagtccaccggcgcagaatcagtacgccctcgcgttaccaaccaatccaattctcatc
gtaccatattcattgtttcggagtgccagcaccttgcctggtacaactttaccagatccc
gacacgccgtgctttctgttgccgaatggcacattccaaccaataagtcgagcgttggca
aattcaaacacagagggtaaagaagccgaagtgttaaagtctgcaaaccggcctcgtgaa
ccgtcaagggacaccaccacaccattagatctgagcgtgcgccgcacacctgaatcagtc
acaactgatgaacacgagaaagaaaacagacttcggtcaacgacaccagaacagatagtc
tgtgctccgtcattacccgggtcacctgccacaccctcaccgtcaagaagatcatcttca
ccaagcggtgagagttcacctaagcgaagacggcgaaactcaagggatcctactccaaag
ccactaataccatcgcctcatgatgataaattttcaggtttggttcctcaatcgataata
ccaccagctctggccctacgactcgcaacagaattgcccgttaccacgtcatcacctcaa
gttttggtcaaacaaggtgtatccaaatgcaaagagtgcaatattgtattctacaagtat
gaaaactatcgcattcacaagcggaactactgctctgctcgaggtggtgaagaacgcgca
agtcctgcgcccccggagcccgggcctccgccgcagtaccgccaactgatatgtctagcg
tgcggcatacattttagttccttagataatctcaccacacaccaatcgttctattgcacg
aagagagacacgcgttctccgagaagtttgccagaagtggcgagaccggcctcgaattct
gagggaggatggaaatgtccttgctgcgatgtcgtttcccctactgcagccgcagcacag
agacacgtggaaggccatggtgcagtaaaagcattccggtgcacaatctgtcgataccgg
ggcaacacgctgagaggaatgcggacccacatacgcatgcacttccgggacaagcctgca
gatctgcaggaggagagctttatctcgtgcgtggtggaggacgacagtcgtgaagcttcg
tctccgagcccggccggcggcgagcgcgtacaccgctgcggcagctgtgcgtacacgtcc
acgtaccgcggcaacgttgtacgccacgcgcgcctcgtgcacgccgccgacgacccggaa
cccgagcggatgtcccccgcgcccgcgcccgtggccccgcccgctctcgtcaagaaggag
cccgagctcgacgaggagacccccaactactgcaagtcgtgcaacatctccttcaaatac
gtcaacacttacaaagcgcacaaacagttctactgcaccgcagccaatcaggacgccgcg
gccaataacaatctacccgcacgcgtcactgatacgcccgttgtctag
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