KEGG   Leptidea sinapis (Wood White): 126980144
Entry
126980144         CDS       T09272                                 
Name
(RefSeq) RNA polymerase II elongation factor Ell isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    126980144
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsin01009]
    126980144
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsin03021]
    126980144
Protein phosphatases and associated proteins [BR:lsin01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     126980144
Transcription machinery [BR:lsin03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     126980144
    Little elongation complex (LEC)
     126980144
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 126980144
NCBI-ProteinID: XP_050685681
LinkDB
Position
5:complement(13524692..13589755)
AA seq 640 aa
MAALPAGVQYALSSESSYKENKELVFVKLTDSALKAIEDFIRNNRDKLAKPKIQFLPGNE
GKISIPAPSSGNGSSSGESTFHFSINSNAEMEGPQGSFECVRGGSIGGGAARRLESCGPL
PRRMRVHANDDSYEATRDRMSRTIAAEQSKCTRVIKPNQTDIGRRVKLRNTHPMFTNGPA
SLADRTERAERPERQERTERPDRPERPDRAERPDRPERQERPERPERPERPERSERPERP
EKPERPERADRPDRIERPAVVPPVVRPQPQQQPQPHSNQQQRPPSNPDLSRRPIKERLIQ
LLALKPYKKPELYARLNSEGLKDKERIMVNKILPEIGTLKDNCYHLRRHVWNDVNEDWSF
YSEEEKRMLKRRKPQNLTPPLSSDSANSLSPRASPGAGKRAGGAAGEEAPAGKKQRISHY
RRPSPPSSGYATTSSGERHASDNEDDRTSKKDNGYTLNFTTVKDICPSPVKANGFSRSSP
PVVEQASITVKDITNTEPLENTALTSVPEENTTELVDIERQYPPITCSSVRRAYKNEFAT
LYTEYRALYARVAQVASLFTQLEQQLKRAEPKSPQHRTIEQRIVEEYQRVRNDASYQRER
RRVNYLHRKLNHIKRMVLQYDRLRNLKPERVAAASTTQAY
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggcggccttgccagcaggtgttcagtatgcattatcatcagagtctagttataaagaa
aacaaggaactagtgtttgtgaaattaacggattcagcactaaaggctatagaagacttc
attagaaataatagggacaaattggcaaaacctaaaatacagttcctacccggaaatgag
gggaaaatctcaattccggctccatccagtggaaatggatcatcgtcgggggagtccaca
tttcactttagcatcaacagcaatgctgaaatggaaggtccacagggttcgttcgagtgc
gtgcgcggcgggagtattggcggcggcgccgcgaggcgtcttgagtcgtgcgggccgttg
ccgcgacgtatgcgcgtgcacgctaacgacgactcgtacgaggcaaccagggatcgcatg
tcgcggaccatcgcggcggaacagagcaaatgcactcgcgtcattaaacccaaccagaca
gatataggtagaagagtaaaactacggaatacacaccctatgttcacaaatgggcctgct
tctcttgcggaccggacggagcgggcggaacgaccagagagacaggagcggactgagcga
ccggaccgtcccgagcgcccggaccgcgccgagcgaccggaccgccccgaaagacaggaa
cgtcctgaaagaccggaacggcccgaaagacctgaacggtccgaaagaccggaacggccc
gaaaaacctgaacggcccgaaagagcggaccgaccggaccggatagaacggcccgctgtt
gttcctcccgtggtcagaccacagccgcaacagcaaccgcaaccgcattctaaccagcag
caaaggcctccctctaaccctgacctatcgaggcggcccatcaaagaaagacttatacaa
ttattagccctgaaaccctataagaagccagaactttacgccagactcaacagtgagggc
ttaaaagacaaggaacgtattatggtgaacaagattctgccagagattggcacgctcaaa
gacaattgttaccacttacgtaggcacgtgtggaacgacgtcaacgaagactggtcgttc
tactccgaggaagagaaacgtatgctcaagaggcggaaacctcaaaacttaactccaccg
ctgagtagcgattcggcgaactcgctgtcgccgcgggcgtccccgggggcgggcaagcgg
gcggggggtgccgcgggggaggaggcgcccgcgggcaagaagcagcggatatcacactac
cggagaccgtcgccgccctcctccgggtacgccaccacctcctcgggggagcggcacgcg
tccgacaacgaggacgaccggacgagtaaaaaggacaacggttacacccttaacttcaca
actgtaaaggatatctgcccgagtccagtgaaagcgaatggctttagtagaagtagtcct
ccagtagtagagcaagctagtatcacagttaaagacatcacaaatacagaacccttagaa
aatacagctttaacgtctgtgcctgaagaaaatacgactgaattggtagatattgaaaga
caatacccgccgataacgtgttcgagcgtccgtcgcgcgtacaagaacgagttcgcgact
ctgtacacggagtaccgggcgctgtacgctcgcgtcgcgcaggtcgcctcactcttcacg
cagcttgaacagcaacttaagcgggccgagccgaagtcgccgcaacatcggaccatagag
cagcgtatcgtagaggagtaccagcgcgtgcgcaacgacgcgtcgtaccagcgcgagagg
cggcgagtcaactacctgcaccgcaagctcaaccacatcaagcggatggtgctgcagtac
gatcgactgcgtaacctgaagccggagcgcgtggccgcggcgagcacgacgcaggcgtac
tga

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