Ligilactobacillus salivarius JCM1046: LSJ_0113
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Entry
LSJ_0113 CDS
T03340
Symbol
dacC
Name
(GenBank) D-alanyl-D-alanine serine-type carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj00550
Peptidoglycan biosynthesis
lsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LSJ_0113 (dacC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsj01002
]
LSJ_0113 (dacC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lsj01011
]
LSJ_0113 (dacC)
Enzymes [BR:
lsj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LSJ_0113 (dacC)
Peptidases and inhibitors [BR:
lsj01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LSJ_0113 (dacC)
Peptidoglycan biosynthesis and degradation proteins [BR:
lsj01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LSJ_0113 (dacC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AIR09879
UniProt:
A0A089Q9Z7
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All DBs
Position
127524..128780
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AA seq
418 aa
AA seq
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MLKKLKKLGITILTSLIIVTGVGQLSLIKADQTLPQLDLEAKSAIAIDAKTGQIIYAKDD
KQIYPVASMSKLLTAYILLQAIHEGKITWETKVTPTVTEVDISNNTELTNVPLKEGHSYT
IKQLYQAMLVGSANAATMLIGNAISGTQTKFIDKMRETAKSLGITDAKIYSANGLTAKYL
GDEIYPNTDENAENEFSVRDMAIISQKLIKEYPEILETTKLTKIDFNDNGEITTVNNTNE
LLQDDSHLEVDGLKTGTSDAAGYCFASTTNKDGHRIITVIAGAKDNDARFDQTKNLLNYI
YNNYDYLAISTDRALRQNVKVKYGKQGSVPATIGNNLSLWVPKNIKEKALQIKLIPKSST
IEAPIKQGEVVGEYQISVAGNLGSIDGSNNLKTKALSDNNVEGINIFIKWWQMLSDAI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgcttaagaaattaaaaaaattaggaataactatcttaacttctttgataatagtaaca
ggtgtaggacaattaagtttaatcaaggctgatcagactttgccacaactagatttagag
gctaaatctgcaattgcgatagatgcaaaaacgggacaaattatctatgccaaagatgat
aaacaaatatatccagttgcttcaatgtccaaacttttgacagcttatatattattacaa
gcaattcatgaaggaaaaattacttgggaaactaaagtaactcctactgtaactgaagta
gatatcagtaataatacagagttaacaaatgttcctttaaaagaagggcatagctatact
ataaaacagttatatcaagcgatgttggtaggatcagcgaatgctgcaacaatgttgatt
ggtaatgccatttcaggaacacagacaaaatttatagataaaatgagagaaactgctaaa
agtttaggaattacagatgctaagatctacagtgcgaatggactaacagctaagtatttg
ggcgatgaaatttatcctaatacagatgaaaatgcagagaacgaattttcagtacgagat
atggctattatttcgcaaaagttgattaaagagtatccagagattttagaaacgactaaa
ttaactaagatcgattttaacgataatggagaaattacaactgttaataatacaaatgaa
ttactacaagatgattcacatttagaagttgatggtcttaaaacgggaacatcagatgca
gcaggttactgttttgcatcaacaactaacaaagatggtcatcgcatcataacagtaatt
gctggggcaaaagacaatgatgctagatttgatcaaactaagaatttgttaaattatatt
tataataattatgattatttagctataagtactgatcgagctttaagacagaatgttaaa
gtaaagtatggaaagcaaggtagtgtaccagcgacaattggaaataatttaagtttatgg
gtacctaaaaatattaaagaaaaggcattgcagattaaattaataccaaaatcttctaca
atagaagcaccaatcaagcaaggtgaagtagttggagagtatcaaatatctgttgctggt
aatttaggatctatagatggttcaaataatttaaaaactaaagcattatctgataataat
gtagaaggaattaatatctttataaaatggtggcaaatgctgagcgatgcaatatag
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