Ligilactobacillus salivarius JCM1046: LSJ_0240
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Entry
LSJ_0240 CDS
T03340
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsj03110
]
LSJ_0240 (clpC)
Chaperones and folding catalysts [BR:
lsj03110
]
Heat shock proteins
HSP100
LSJ_0240 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
TniB
NBD_SMAX1
nSTAND3
AAA_14
IstB_IS21
AAA_18
UVR
ATPase_2
AAA_7
Zeta_toxin
RNA_helicase
bpMoxR
AAA_24
RuvB_N
DNA_pol3_delta2
ABC_tran
AAA_28
Torsin
Trans_coact
DEAD_assoc
Caprin-1_dimer
Motif
Other DBs
NCBI-ProteinID:
AIR09988
UniProt:
A0A089QDY7
LinkDB
All DBs
Position
254857..257355
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AA seq
832 aa
AA seq
DB search
MVMAMEERYTPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTE
VDVREEIEHIVGYGNLQRRGADTYLPYSPRTRYVLERAREHAKLFNVEKVGTEHILLALL
EDDKTISSRILAALNIDLRKVKNITYRTMGVDATTANRTRKKLALSEKKQDNGTPTLDEL
ARDLTEMVRKDQIDPVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKIV
NDEVPDNLKNKRVMMLDMGSLVAGTKYRGEFEDRLKKIIEEIREDGNVILFIDEMHTLIG
AGGAEGAIDASNILKPALARGEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTPEV
ALTILKGLRPKYEKHHQLQITDEALESAVKLSKRYIVSRFLPDKAIDLMDEAAARVRINN
AQKVDKVSAIKKKLSELSQEKTEALLKEDFEKAAEIRNEELKIQEKLEKQIQRDKDEEDS
NNYRVKVTAEDIAEVVSEWTGVPVTQINRSEGDRLIRLEKILHNRVIGQDEAVKAVSKAI
RRARSGLKDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYTTS
RLIGSPPGYVGYDEGGQLTEKVRNNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKG
RKVDFRNTIIIMTSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFLNR
LDETVVFHSLNKEEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGARP
IRRVLQDKIEDLLSEELLAGNIETGATVTIGAKKGEITIKVKNPVAAEKINS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggttatggctatggaagaaaggtatacaccgagtgctaaacaagtattagttcttgca
caacaacaagctaattacttcaagcatcaagcaataggaacagagcatttgcttttagca
ctaacaatggagaaaaatggcgtagctgctaaagtattacaaagctttgtagtaactgaa
gtagatgtgcgagaagaaattgaacatatcgtaggatatggtaatttacaacgtagaggc
gctgatacttatttaccatattccccaaggactcgttatgtattagagcgtgctagagaa
catgctaaactttttaatgttgaaaaggtagggacagaacatattttgttagcactatta
gaagatgataaaactatttcttcacgtattctagcagctctgaatattgatttacgtaag
gtgaaaaatattacctatcgtacaatgggtgtagatgcaacaacagctaatagaacacgt
aagaaattagcgttatcagaaaagaaacaggataatggtacacctacgttagatgaatta
gcacgtgatttgacagaaatggtgcgcaaagatcaaattgatccagtagttggtagagat
aatgaaattaaacgtgttgttcaaattttaagtagaagaacaaagaataatccagttctt
ttgggagaaccaggtgtaggtaaaacagctgttgcagaaggattttcacagaagattgta
aatgatgaagttcctgataatttgaaaaataagcgtgtaatgatgcttgatatgggatct
ttggttgctggaacaaaatatcgtggtgaatttgaagatcgattaaagaagattattgaa
gaaattcgtgaagatggcaatgttattttattcattgatgaaatgcatactctaataggc
gcgggtggtgctgaaggcgcgatagatgcttccaatattttaaaaccagcattagcgcgt
ggtgaagtacaagtaataggtgcaacaactttaaatgaatatcaaaaatatgttgaagct
gatgcagctttggaaagacgctttgctagtgtgacaatcaatgaaccaaccccagaagta
gcgttgacaattctaaaaggattacgtcctaaatatgaaaaacatcatcaacttcaaatt
acagatgaggcattagagagtgcagttaagttaagtaaaagatatattgtttcaagattt
ttacctgacaaggcaattgatttaatggatgaggctgctgctagagtaagaattaataat
gcacaaaaagtggacaaagtttctgcaataaagaagaaattatcagagctttcccaagag
aagacagaagcgttgttaaaagaagattttgaaaaagctgcagaaatcagaaatgaagaa
ttaaagattcaagaaaagcttgaaaagcaaatccaacgtgacaaagatgaagaggatagc
aataactatcgtgtaaaagttacggctgaagatattgcagaagttgtttctgaatggact
ggtgttccagtaactcaaattaatcgttctgaaggagaccgactaattagattagaaaag
atattgcataatcgagttataggacaagatgaagctgttaaagcagtaagtaaagcgata
agaagagcaagaagtggtttgaaggatcctacaagaccaattggctcatttatgttctta
ggtcctacaggtgtaggtaaaactgaattagctaaagctttagcagaagctatgtttggc
tcagaggattcaatgattagaattgatatgagtgaatatatggagaaatacacaactagt
cgtttaattggatctcctccaggatacgtaggatatgatgaaggtggacaattaactgaa
aaggttagaaataatccttattcagtagtattattagatgaagttgaaaaagctcataat
gatgtttttaatatcttgttacaagtattggatgatggatttttaactgattctaaaggt
agaaaggtagacttcagaaatacaattatcattatgacatctaacttaggtgctacagcc
ttacgcgatgaaaaatcagtaggttttggtgcaaaagatgtcagcgatgattatgaagca
atggcagcaaaagttagagagacattgaagaagacttttagaccagaattcttgaatcgt
cttgacgaaactgttgtattccattcgcttaataaagaagaaattcatcaaattgttaaa
ttgatggctaagaatattatagataggattaaagaacaaaatattaatctgaaaattacc
cctgcagcaatagatatagttgcagaagctggatttgatgctgaatatggtgctcgtcct
attagacgtgtccttcaagataagatagaggacttattaagtgaagaattattagcaggt
aatatcgaaactggagcaacagtaacaataggtgctaaaaaaggtgaaataacgataaaa
gttaagaatccagtagctgcagaaaaaataaatagttaa
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