Ligilactobacillus salivarius JCM1046: LSJ_0264c
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Entry
LSJ_0264c CDS
T03340
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj03420
Nucleotide excision repair
lsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSJ_0264c (rep)
03430 Mismatch repair
LSJ_0264c (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_0264c (rep)
Enzymes [BR:
lsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSJ_0264c (rep)
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSJ_0264c (rep)
MMR (mismatch excision repair)
Other MMR factors
LSJ_0264c (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
UvrD_C_2
AAA_30
NACHT
DEAD
TLE_N
AAA_16
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AIR10008
UniProt:
A0A089QE04
LinkDB
All DBs
Position
complement(289306..291573)
Genome browser
AA seq
755 aa
AA seq
DB search
MDNEKALEQKRVDDVMNEIQKQLDATQIEYDKAHKETTSVERNYVQNARVNTYEVDDQME
TNAEIQQQKNLVAKTIENETILKKQLSTLKILQDSAYFGRIDIHENGEEDSETLYIGTSS
LVDENQDFLIYDWRAPISSIYYNGTLGPVSYEIPMGEQFAELKKKRQFTIKKGIITNMFD
TNETIGDEILQSVLGEHSDEYMRNIVATIQAEQNDIIRDVKHDLLLVQGVAGSGKTSAIL
QRIAFLLYHSRDKLNAEQIVLFSPNLLFSHYISEVLPSLGEKNMRQIILAEFLNNRFEGL
QVESLFDKYEKKITSSKKTNSIESIKEDPQFMHTVEEYVQNVSPSQLRFTDIMLDSENFF
SHNEIHDIYSQLPQAMKPSQKFAETKNLLIKQLNRKIKENAQADWVRSEIENLSDEEYYD
LLGTKRRHAFQAIDDEEFYIGRKIVKKRFAPVYDALYNNYFIDYYAQYSDFLANKLPEAV
ELFNQNLEFHKIDLVDAAPLLYLRDLLTGSGRNQAIAHLFIDEMQDYTLPQLMYLKYIFP
NAKLTLLGDSEQALFNEFRTPQELLDYFNKHLNVKKSRIIKLNKSYRSTQQITNFMKALL
PDGNEIQAFTRQGKKPELIISSKENGLHALKLELKQRDLSSPVALITKNQAESDFLYQKL
RKSFDSVTLLEDKDRSLPKGIVILPIYLAKGLEFDDVIAYDISHDNYSGINDTGILYTIC
SRAMHRLTLISCGKPSSLIMSVPSDLYTTKSTVTL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
ttggataatgaaaaagctctggaacaaaaaagagtagatgatgtaatgaatgaaattcaa
aagcaattagatgctactcaaattgaatatgataaagctcataaagaaactacttcggtt
gaaagaaattatgttcaaaatgctagagtcaatacatatgaagttgatgatcagatggaa
acaaacgccgaaattcaacagcaaaaaaacttagttgcaaaaacaatagaaaacgaaaca
attttaaagaaacaattatccactctaaaaatcctacaagattctgcttactttggtaga
attgatatccatgaaaatggagaagaagattccgaaactctttatatcggaacatcttca
ttggtagatgaaaatcaagattttctcatctatgattggcgtgcccctatttcttctatt
tactacaatggtacacttggacctgtatcctatgaaatacctatgggagaacaatttgct
gaattaaaaaagaaacgtcaatttactataaaaaaaggtatcattactaatatgtttgat
actaatgaaacaattggtgatgaaatcttgcagagtgttttgggagaacattctgacgaa
tacatgcgcaatatcgttgctactattcaagctgaacaaaatgatattatccgcgatgtt
aaacatgacttgcttctagttcaaggagtagctggttctggaaaaacttctgctatcttg
caaagaattgcttttcttttatatcacagtcgtgacaaacttaatgctgaacaaattgta
cttttttcacctaatcttttatttagtcactatatttctgaagtgttgcctagtttaggt
gagaaaaacatgcgccaaattattttagcagaatttcttaataatcgttttgagggatta
caagttgaaagtctctttgataaatatgaaaagaagatcacttcttctaaaaaaacaaat
tcaattgaaagtattaaggaagatccacaatttatgcatacagttgaagaatatgtccaa
aatgttagcccatcccaactaagatttactgacattatgctagattccgagaatttcttt
agtcataatgaaattcatgatatctattcccaacttccacaggctatgaaacctagtcaa
aaatttgctgaaactaaaaacttacttattaaacaattaaatagaaaaattaaagaaaat
gctcaagctgattgggttcgtagtgaaattgaaaacttatcagatgaagaatactatgat
ttacttggtactaaaagacgtcatgcctttcaagcaattgatgatgaagaattttatatt
ggtagaaaaatcgtaaaaaaacgttttgctcccgtatatgacgctttatataacaattat
tttattgactactacgctcaatattctgattttttagccaataaattaccagaagccgtc
gaactttttaatcaaaatttggagttccataaaatagatttggttgatgctgctcctctt
ttatatttacgtgatttgctaacaggtagtgggcgtaatcaagctattgcacatctattt
atcgatgagatgcaagactacacattaccacaattaatgtatttaaagtatattttccct
aatgctaaactcactcttttaggtgatagtgaacaagcattgttcaatgagtttagaaca
ccacaagagttactagattactttaacaaacatctcaatgtcaaaaaatcgcgcatcatc
aagttaaataaaagttatcgttcaacacaacaaataaccaattttatgaaagctttatta
ccagatggcaatgaaattcaagcttttacacgccaaggtaaaaaacctgaattaattatc
tcttctaaagaaaatggattacatgcattaaaacttgaattaaagcaacgtgatttaagt
tccccggttgctttaataactaaaaaccaagctgaaagtgacttcttatatcaaaaactt
cgtaaaagtttcgattctgtcactttactagaagataaagatcgttcattacctaaaggg
attgttattctaccaatctatcttgctaaaggattggaatttgatgatgttatagcttat
gatatttcacatgataattattccggaataaatgatactggaattttatacacaatttgt
tctcgtgcgatgcacagactaactttaatttcatgtggaaagccatcatctttaattatg
agtgttccatctgatttatacactactaagtcgaccgttactttgtaa
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