Ligilactobacillus salivarius JCM1046: LSJ_0581
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Entry
LSJ_0581 CDS
T03340
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LSJ_0581 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_0581 (xseB)
Enzymes [BR:
lsj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LSJ_0581 (xseB)
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LSJ_0581 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF1657
NagA_C
MG280
Retrotrans_gag
Myosin_VII_N
Acetyltransf_11
ThrE
Motif
Other DBs
NCBI-ProteinID:
AIR10276
UniProt:
A0A089QH21
LinkDB
All DBs
Position
580624..580851
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AA seq
75 aa
AA seq
DB search
MAEKVTFEQDMKNLEEIVKRLEQGDIPLEEAIEKFKQGMDLSKKLQNTLLQAEETLTKVI
DDNGDEQLFEKENED
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagtaacttttgaacaagatatgaagaaccttgaagaaatagtaaaaaga
cttgagcagggagacattccattagaagaagcaattgaaaaatttaaacaagggatggat
ttgagtaaaaaattacaaaatacacttctacaagcagaagaaacattgactaaagtaata
gatgataatggagatgaacaattatttgaaaaagaaaatgaggattag
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