KEGG   Ligilactobacillus salivarius JCM1046: LSJ_0621
Entry
LSJ_0621          CDS       T03340                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lsj  Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:lsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lsj03016]
    LSJ_0621 (truB)
Enzymes [BR:lsj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LSJ_0621 (truB)
Transfer RNA biogenesis [BR:lsj03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LSJ_0621 (truB)
 Prokaryotic type
    LSJ_0621 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: AIR10316
UniProt: A0A089QH64
LinkDB
Position
617716..618624
AA seq 302 aa
MDGILPLYKERGMTSNDAVIKCRKIFKTRKIGHSGTLDPEVDGVLPICVGKATKVVNYLM
DSGKVYKGEITLGFATTTEDLEGEVISKVKLSKPFSDEKINEILSSFIGDIIQVPPIYSA
IKVNGKKLYEYARAGEKVDIPERRVHIEYFKQIFPSKFDKEKGQQTIYFEVGCGKGTYVR
TLAVDVGKKLGVPAVMSDLTRLKSGGFQIGMAKSLSQLEKLAHENKLSESLYPIDYAVKD
LPRYDLKLEQWKIVKNGGFLSVNTFKENYDRVNLFYDDRIRCIYQYNKEKNRYQSERMID
LS
NT seq 909 nt   +upstreamnt  +downstreamnt
atggatggaattctacctttgtataaagaacgtggaatgactagtaatgatgctgtcata
aaatgtagaaaaatttttaagactagaaaaataggacatagtggaactttagatcctgaa
gttgatggtgttttaccgatttgtgtgggaaaagctacaaaagtggttaattatttaatg
gattcaggtaaagtatataaaggcgaaataacattgggatttgctactactactgaagat
ttggaaggcgaagtaatttcgaaagtaaaactttctaaaccattttcagatgagaaaata
aatgaaattttgtctagttttataggtgatataatacaggttccgcctatatattctgct
ataaaagttaacggtaaaaaattatatgagtatgctagagctggtgaaaaagtagatatt
ccagaaagaagagttcatatagaatattttaaacaaattttcccttcaaaatttgataaa
gaaaaaggacagcaaactatatattttgaagtcggttgtggtaagggtacatatgttaga
actttagcagtagatgttggaaaaaaattaggtgttccagctgttatgagtgatttgaca
aggcttaaaagtggtggctttcaaattggaatggcgaagtcattatcacaattagaaaaa
ttagcacatgaaaataaattatctgaatcattatatcctattgattatgctgttaaagat
ttaccaagatatgatttgaaattagaacaatggaagatagtgaaaaatggaggcttttta
tccgtaaatacttttaaagaaaattacgatagagtgaatcttttctatgatgatagaatt
agatgtatttatcaatataataaagaaaaaaatagatatcaatctgagagaatgatagat
ttaagttag

DBGET integrated database retrieval system