Ligilactobacillus salivarius JCM1046: LSJ_0660
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Entry
LSJ_0660 CDS
T03340
Name
(GenBank) Primosomal protein n-prim
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LSJ_0660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_0660
Enzymes [BR:
lsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSJ_0660
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LSJ_0660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
PriA_C
DEAD
Helicase_C
PriA_CRR
AAA_30
AAA_19
PIF1
DAP3
DUF3638
TrwB_AAD_bind
zinc-ribbons_6
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIR10354
UniProt:
A0A089QBC7
LinkDB
All DBs
Position
655545..657923
Genome browser
AA seq
792 aa
AA seq
DB search
MQTNKPFTYKIPENLQGQLEKGMRVVVPFGKGNRLIQGFIINFKSSSENIDNIKEIDSVL
DLEPVLNEEMLEIADWLSKYTFSFKIRCLQVMLPSIMKAKYERKFTYIGEQDEKVKELFS
GKSDLLDSDKKVNSSTINKLLQLRKQGKIKVDYIVKNKAKAKLVSVVKTKLSLQEYENEL
GSISPNASKQKKLLNTLKEFPVGSKIRQSELREKYNFTNADIKNASEKGWIDVVKVEKYR
DPFANYKSYYEKKHKLTQEQSKVVKKLDNDIENDKARVSLLQGVTGSGKTEVYLQVIDTA
LNQGKTAIVLVPEISLTPQMVKRFRARFGTKVAVLHSGLSIGEKYDEWRRIEREEAQVVV
GARSAIFAPLKNLGVIIVDEEHESSYKQDEMPRYNAKDVAKWRGIYHSCPVIFGSATPSL
ESRARAQKGVYDWLRLTKRVNNQKLPKVQIIDMREAVKTSPIPDFSLKMVNSIQEKLDKK
EQIVLLLNRRGYSTFMMCRECGYVIKCPNCDISLTVHLDSRSLKCHYCGYETRIPYECPS
CSSKKIRYYGTGTQKIEKELKGLFPQARILRMDVDTTRKKGAHEKLLRTFGDGKADILLG
TQMIAKGLDFPNVTFVGVLNADTSLGISDFRASERTFQLLTQVSGRAGRADKDGEVIIQT
FNPDHYAIKLAQNHDYENFFYKEMELRHNLNYPPYYYTLKITVSSNSESLTARTIFKINN
EVRMNVSKGTIILGPTPQTVTKINNRYYYQIVIKYKKETKLINYLQDLLLSSQRIEREGI
QIVIDREPLKFN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactaataaaccatttacttataaaatacctgaaaatttgcagggacaactagaa
aaaggaatgagggtagtagttccctttggaaagggaaacagattgattcagggatttatt
ataaattttaagtctagtagtgaaaatatagataatataaaagaaattgatagtgtatta
gatttagaacctgtattgaatgaagaaatgttggaaattgcagattggttgtcaaagtat
actttttcattcaaaattaggtgccttcaagtaatgcttccaagtattatgaaagctaaa
tatgagcgaaagtttacttatattggagagcaagatgaaaaagttaaagagctattttca
ggcaaatctgatttattagatagtgataaaaaagtaaattctagtacgataaataaatta
ttacagttaagaaagcaaggaaaaataaaagtagactacattgtaaaaaataaggctaaa
gcaaagttggtctcagtggttaagacaaaattatctttacaagagtatgagaatgagtta
ggaagtatttcccctaatgccagcaaacaaaaaaagttactaaatacattaaaagagttt
cctgtggggtcaaaaatacggcaaagtgaattgagggaaaaatacaattttactaatgct
gatataaaaaatgctagtgaaaaaggatggatagatgtagtaaaagttgaaaaatatcgc
gatccatttgctaactataagagttattatgaaaaaaagcataagcttacacaagaacaa
agtaaagttgtgaaaaaattagataatgatatcgaaaacgataaagcgcgagtatctttg
cttcaaggggtaacaggaagtggaaaaacagaggtatatttacaagtgatagatactgct
cttaatcaagggaaaacagctattgtattggttcctgaaatatcgttaacaccgcaaatg
gtaaaaagatttagagctaggtttggcaccaaagttgcagttttgcatagtgggctttct
ataggagaaaaatacgatgaatggagaagaatagagagagaagaagcacaggtagttgta
ggagcgcgatctgctatttttgctcctttgaaaaatttaggagtcataatagtggatgag
gaacatgaatctagttacaagcaagatgaaatgcctagatataatgcaaaagatgttgct
aaatggcgtggaatataccactcatgtccagttatttttgggagtgcaaccccatcacta
gagtctagagctagggcacaaaaaggagtatatgattggttaagattaactaaaagagtt
aacaatcaaaagctacctaaagtgcaaattattgatatgagagaggcagtaaaaacctct
ccaattccagatttttctcttaaaatggttaattcaattcaggaaaaattagataaaaag
gaacaaatagtgcttctattaaatcgtagagggtattcgacgtttatgatgtgtagagag
tgtggttatgtaataaagtgtcctaactgtgatatttctttgacagttcatttagatagc
agatctttaaagtgtcattattgtggatatgaaacgagaataccatatgaatgtcctagt
tgtagtagcaaaaaaataagatattatggtactggaacacaaaaaattgaaaaagagcta
aaaggtctatttccacaagcccgaattttgagaatggatgtagatacaactagaaaaaaa
ggagcacatgagaaactattaagaacatttggagatggaaaggctgatattttacttgga
acgcaaatgatagctaaaggactagattttccaaatgtaacttttgttggagttttaaat
gcagatacatcacttggaatatcggattttagagcaagtgagagaacttttcaactttta
acacaagttagtggacgtgctggacgtgctgataaagatggagaggttattattcaaact
tttaatcctgatcattatgctataaaactagctcagaatcacgattatgaaaattttttc
tataaagaaatggaacttagacataatttaaattatccaccgtattactatacattaaag
ataacagtaagttctaattcagagtcattgacggctagaactatttttaaaataaataat
gaagtaaggatgaatgtctctaaaggaactattatattgggtccaactccacagacggtt
actaaaataaataatcgttattattatcaaattgttattaaatataaaaaagaaacaaaa
ttaattaactatttacaagatttacttctttcaagtcaaagaattgaaagagaaggtata
caaattgtgatagatagagaaccattgaaatttaattaa
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