Ligilactobacillus salivarius JCM1046: LSJ_0742
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Entry
LSJ_0742 CDS
T03340
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj03030
DNA replication
lsj03430
Mismatch repair
lsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSJ_0742 (holA)
03430 Mismatch repair
LSJ_0742 (holA)
03440 Homologous recombination
LSJ_0742 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsj03032
]
LSJ_0742 (holA)
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_0742 (holA)
Enzymes [BR:
lsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSJ_0742 (holA)
DNA replication proteins [BR:
lsj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LSJ_0742 (holA)
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LSJ_0742 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF3788
LCIB_C_CA
DUF7158
Motif
Other DBs
NCBI-ProteinID:
AIR10430
UniProt:
A0A089QCH3
LinkDB
All DBs
Position
745649..746671
Genome browser
AA seq
340 aa
AA seq
DB search
MKVDELRKEIENNSLKNVYLVLGEDTYLNNKVKELFWNYIPESDREFNAAIYDMETTSIA
TAIADAISAPFFSEKRLVIITHPYFLTGDTKKHSIEQDVNELIGYLQNPSPDTLLVVLAS
YDKLDSRKKVVKELKSKAEIVDTSSLNESEIRQYLIKYCDGKKVIIEKRAIDRLIQLTNA
NFSKIMNELSKLIIATVDTKKITVSEVDGLVTKSLEQNVFDLVDFVRDKKIKEAFELYHE
LLEQKEEPIKINAILIGQFRLLLQVKILQKHSYDQGSIASTLKVHPFRVKLAMQNARKFS
NNSLKSAYLGLAEIEEKLKTSSQNPELLFQLFLTKYAYKK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtagatgagttgcgcaaagaaatagaaaataatagtctaaaaaatgtttattta
gttttaggggaagatacatatcttaataataaagttaaagaattattttggaactatatt
cctgaaagtgatagggaatttaatgctgcaatttatgatatggaaactacttcgattgca
actgcaatagcagatgcaatttctgctcctttttttagtgaaaaaagattggtgattatt
actcatccatattttttaacaggggatacaaagaaacattctatcgaacaagatgtaaat
gaattgataggatatttgcaaaatccttctccagatactttgttagtagtattagcaagt
tatgataagttagattcacgtaagaaagtagttaaagagttaaagtcaaaagctgaaata
gtggatacttcctcgttgaatgaatctgagataagacaatatcttataaaatattgtgat
gggaaaaaagttataattgaaaaaagagcaatagacagattaattcaattaaccaatgcc
aatttctctaaaataatgaatgaactttctaaactaataatagcaactgttgatactaaa
aagattacagttagtgaggtagatggattagttacaaaatcgctggaacaaaatgttttt
gacttggtagattttgttcgtgataaaaagataaaagaagcatttgaattatatcatgaa
cttttagaacaaaaagaagagccaataaaaataaatgcgatcttaattggacaatttaga
ttacttttacaagttaaaatattacagaagcatagctatgatcaaggaagtattgcctca
actttaaaagttcatccctttagagtgaagttagctatgcagaatgctcgtaaatttagc
aataatagtttgaaatctgcttacttaggtttggccgaaatagaagaaaagttaaaaaca
agtagtcagaatccagaattgttgtttcaattatttttaacaaaatatgcgtataaaaaa
taa
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