Ligilactobacillus salivarius JCM1046: LSJ_0813c
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Entry
LSJ_0813c CDS
T03340
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj03030
DNA replication
lsj03430
Mismatch repair
lsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSJ_0813c
03430 Mismatch repair
LSJ_0813c
03440 Homologous recombination
LSJ_0813c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsj03032
]
LSJ_0813c
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_0813c
Enzymes [BR:
lsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSJ_0813c
DNA replication proteins [BR:
lsj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LSJ_0813c
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LSJ_0813c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
TM2
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIR10496
UniProt:
A0A089QHP7
LinkDB
All DBs
Position
complement(819634..820782)
Genome browser
AA seq
382 aa
AA seq
DB search
MKKIKDLIEKNFIKSKNIWLAYLLAIFLGTFGLHRFYLKKNGLKMLLITVLTLGVGVIIT
YPMLILDLIRIPSWVEECNENNLTPPTEKNIQTNKSSKHINNTVTSTSLNESMSISTSLN
ESLSESLSTSNSLSDSLSASTFLSDSLSSSTSLNNSLSTNIEETNSSNIDKPRNSQVISY
DFKPKLQPVMEFEPKTKTKKKSTRTKTNSSETIKISRLRKLRDDYVVVDIETTGLSPGED
KIIQLSAIKYIDNKEIAVFNEYINPHTKLSDFIINLTGISQDVVDHGKELNDIKDDFISF
YGDLPLVGHYINGFDIKFLIANNLVIKNVATIDTLPLARKLDLENAKLPTVKKFLGINNN
SHDSLDDCYTTNALYQFAKENF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataaaagacttaatagagaaaaattttattaaatctaaaaatatttggcta
gcgtatttgctagctatatttttgggaacgtttggattacataggttttatttaaagaaa
aatggattaaagatgttattaatcactgttttaacattgggagttggagtgattatcacc
tatccaatgcttattttagacctgattaggattccaagttgggtagaggaatgcaacgag
aataatctcacacctcctaccgaaaaaaatatacaaactaataaatctagtaaacatatc
aataacactgtaacatcaacaagcttgaatgaatcaatgagtatttcaaccagtttaaat
gaatcgttaagtgaaagtttatctacgtccaactcactaagcgatagcttgagtgcatca
acattcttgagtgatagcttaagttcctcaacaagcttaaacaattcattgagtacaaat
attgaagaaacaaattcatctaacattgataaacctaggaacagtcaagttataagttat
gatttcaaaccaaaacttcaacctgtaatggaatttgagccaaaaactaagaccaagaaa
aaatctacacgaacaaagactaattcatcagaaactattaaaatctctagactcagaaaa
ctcagagatgattatgtagtagttgatattgaaactactggattaagtccaggtgaagat
aaaattattcaattatctgctataaaatacattgataataaagaaattgcagtattcaac
gaatacatcaatccacacactaaattatcagattttataattaatttaactggcatcagt
caagatgttgtagatcatggtaaagaattgaatgatataaaagatgattttatttctttt
tatggtgatttacctttagttggacattacattaatggttttgatataaaattcctaatt
gctaacaatttagtcattaaaaatgtggcaactattgatacactacctttagctagaaag
ttggatttggagaatgctaaattacctaccgtaaaaaaattcttaggtattaataacaat
tctcatgattcgttagatgactgttatactactaatgctttatatcaattcgcaaaggaa
aatttttaa
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