KEGG   Ligilactobacillus salivarius JCM1046: LSJ_0891
Entry
LSJ_0891          CDS       T03340                                 
Symbol
gyrB
Name
(GenBank) Topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
lsj  Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:lsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsj03032]
    LSJ_0891 (gyrB)
   03036 Chromosome and associated proteins [BR:lsj03036]
    LSJ_0891 (gyrB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lsj02048]
    LSJ_0891 (gyrB)
Enzymes [BR:lsj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LSJ_0891 (gyrB)
DNA replication proteins [BR:lsj03032]
 Prokaryotic type
  DNA Topoisomerases
   LSJ_0891 (gyrB)
Chromosome and associated proteins [BR:lsj03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LSJ_0891 (gyrB)
Prokaryotic defense system [BR:lsj02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    LSJ_0891 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: AIR10572
UniProt: A0A089RVF6
LinkDB
Position
894574..896595
AA seq 673 aa
MPKNNYNDDSIQVLKGLEAVRKRPGMYIGSTDSRGLHHLVYEIFDNAVDEALSGYGKEIN
VIIHKDDSITVVDNGRGMPVGMHSMGIPTVEVIFTVLHAGGKFGQGDYKTSGGLHGVGAS
VVNALSSKLTVNTVRDGIEYEEDFVNGGQPVGTLRKIGKAKRKSGTKVTFKPDANIFSTT
KYNFNTLAERLRESAFLLKGVKITLTDERTDPYTEEEFLYAEGIKEFVEYLNEDKDVLGP
VMYFEGKKDGIEVEVAGQYNDGYSETIMSFVNNVRTKDGGTHEAGMKAAWTKAFNEYARK
INLLKDKDKNLEGSDVREGLSAVVSVRIPEELLQFEGQTKGKLGTPEARQIVDSVVNEQL
GYFLMENGDFAQELVRKSIKAREAREAARKARDESRNGKKRRKSERLLSGKLTPAQSKNA
KRNELFLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTQKAKLQDIMKNEEINTMIYTIG
AGVGAEFNIDDANYDKVIIMTDADTDGAHIQTLLLTFFYKYMRPMINAGRVYIALPPLYK
IEKTVKKKRVIKYAWTDAELESATKELKKGYTLQRYKGLGEMNADQLWETTMNPETRTLV
RVRIDDDTIAEKRVTTLMGDKVEPRRKWIEKNVKFTLEEDGSLLDTVVAEGAHGEISDDK
LKDTEALFDKNDY
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgccaaagaataattataatgatgactcaattcaagttctaaaaggcctagaagctgtt
agaaagcgtcctgggatgtacataggttctacagattcacgtggattacatcacttagta
tatgaaatatttgataacgcagttgatgaagcactatctggttatggcaaagaaattaac
gttattattcataaagatgattcaataacagtagtcgataacggacgtggaatgccagtt
ggaatgcattcaatgggaattccaacagtagaagtaatttttactgttttacatgcaggt
ggtaaatttggccaaggcgactataaaacttcaggcggattacacggcgttggtgcttct
gtcgttaacgcactctcctcaaagttaactgtaaatactgttcgagatggcattgaatat
gaagaagattttgttaacggtgggcaacctgtaggaactttacgtaaaattggtaaagct
aaacgtaaaagtggtacaaaagtaacttttaaacctgatgctaatattttttcaacaaca
aaatataattttaatactttagcagaaagattaagagaatctgctttcttattaaagggt
gtaaagattactttaacagatgaaagaaccgacccatatactgaagaagaattcttatat
gcggaaggaattaaagaattcgtagaatatttaaatgaagataaagatgtattaggtcct
gtcatgtactttgaaggtaaaaaagatggtatcgaagttgaagttgcgggccaatataat
gatggatattctgaaactataatgtcatttgttaataatgtccgtactaaagatggtgga
acacacgaagctggaatgaaagctgcatggactaaggcttttaatgagtatgctagaaaa
attaaccttcttaaagacaaagataagaatcttgaaggtagtgacgttcgtgaaggactt
tcagcagttgtttctgttcgcattcctgaagaattactacagtttgaaggacaaactaaa
ggaaaattaggaactcctgaagctcgtcaaattgttgatagtgttgttaatgagcaatta
ggttatttcttaatggaaaatggtgattttgcccaagagttagttcgaaaatctattaag
gcacgcgaagcacgtgaagcagctcgtaaagcacgtgatgaaagtagaaatggcaaaaag
agacgtaaaagcgaacgcctattatcgggtaagttaacccctgcgcaatctaagaatgct
aaacgtaatgaattattcctagtcgaaggtgattctgccggtggttcagcaaaacaagga
agagatagaaaattccaagcaatcctaccattacgaggaaaagtattaaatacacaaaaa
gccaaattacaagatatcatgaagaatgaagaaatcaataccatgatttatactattggc
gctggagtaggtgcagagttcaacattgatgatgcaaattatgataaagttattatcatg
actgatgctgatactgatggtgcacatatccagacattgttattaacgttcttctataag
tatatgcgaccaatgattaatgcagggagagtatacatcgcattaccaccattatataag
attgaaaaaactgttaagaaaaagcgcgttattaagtatgcatggactgatgctgaatta
gaaagtgctactaaagaactaaaaaaaggatacactttacaaagatataaagggttagga
gaaatgaacgctgatcagctttgggaaacaactatgaatccggaaacaagaacgttagtt
cgtgtgagaatagatgatgatacaatagctgaaaaacgtgttacaactctaatgggtgat
aaagtagagcctcgtcgtaagtggattgaaaaaaatgttaaatttactttagaagaagat
ggaagcttgttagatacagttgtcgctgaaggagctcatggcgaaatttctgacgataag
ttaaaggatacagaggctttatttgataaaaatgattattaa

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