Ligilactobacillus salivarius JCM1046: LSJ_0905c
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Entry
LSJ_0905c CDS
T03340
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsj03032
]
LSJ_0905c
03036 Chromosome and associated proteins [BR:
lsj03036
]
LSJ_0905c
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_0905c
DNA replication proteins [BR:
lsj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LSJ_0905c
Chromosome and associated proteins [BR:
lsj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LSJ_0905c
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LSJ_0905c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Rpf1_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AIR10586
UniProt:
A0A089QHX9
LinkDB
All DBs
Position
complement(910287..910562)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAALIERVAEKTGLTKKDATVAVDAVFETIQDALVDGEKVQLIGFGNFEVRERAARK
GRNPQTGEEIEIPASKVPAFKPGKSLKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcagcattgattgaacgcgttgcagaaaagacaggtttaactaagaaa
gatgcaacagttgctgttgacgcagtttttgaaacaattcaagacgcattagttgacggt
gaaaaagtacaattaatcggttttggtaacttcgaagtacgtgaacgtgcagctcgtaag
ggtcgcaacccacaaacaggagaagaaatcgaaattccagcaagcaaagttcctgcattt
aagccaggtaaatctttgaaagacgctgttaaataa
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