KEGG   Ligilactobacillus salivarius JCM1046: LSJ_0940c
Entry
LSJ_0940c         CDS       T03340                                 
Symbol
hsdR
Name
(GenBank) Type I restriction-modification system restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lsj  Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:lsj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lsj02048]
    LSJ_0940c (hsdR)
Enzymes [BR:lsj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LSJ_0940c (hsdR)
Prokaryotic defense system [BR:lsj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LSJ_0940c (hsdR)
SSDB
Motif
Pfam: T1R_D3-like SWI2_SNF2 EcoR124_C ResIII HSDR_N DEAD AAA_22 Helicase_C DarP
Other DBs
NCBI-ProteinID: AIR10620
UniProt: A0A089QCY7
LinkDB
Position
complement(948009..951032)
AA seq 1007 aa
MDLERDIEEKLINRLTQGVSQWTRRDDIKTVSQLWDNFFKILSKNNKAQLHDQPLTENEK
NTIRTQITKPNFYQAAKFMVGANRQVKFHLKREDSTLPDADLTILDNTNIAGGTSVYEVV
HQIQLARKFELDQDRRSDVTLLINGLPMIHIELKKPSESIIKAFNQIQKYINEAKFTDIF
CFIKMFVVSNKTITRYISAGQSLREKFLTAWVDDKNQRVDNYLDFAREVLSIPQAHHMLA
DYTVLDNQAKNIILLRPYQIHAIKAIFKASREQKSGYIWHTTGSGKTLTSYKVARNLLQI
PSIQKTVFLIDRQDLDVQTVSAFEAYAYNDTINVDDTDNSYDLANQLIDNEKKVIVTTRQ
KLQAIFRRIDEQKDNLSKKYLKLKDVKLAFVVDECHRAVTPSQKRELDKFFNKSPLWYGF
TGTPIMDKNARAENGNDARTTKGLYGDLLHTYTIKNAIADNAVLGFQITNIGQENVEDEE
NTEKWDKLYLKDVHMKAVVKKILNLAYVKQGLKDGNRYAAIFTTSSIKQAQKYYHIFRDI
ANGEGEIKVPKVIKEKAVDFPRVAITYSISQNEKDSEDNQKDMKVSLKDYNAMFGTNFEM
GQIDAYNRNVNDRLARKSKQYQAPSQQLDIVIVVDRLLTGFDSPTLSTLYIDRRPMNPQN
MIQAFSRTNRIYDNTKQWGQIVTFQYPETYKKKIDEAIQLYSNGAATSDITAPVWTESRK
KYIAARNGINQYLLDKKALDRIVDAPMEEMKAFAKDFQKFDKAFVAIQTYDEYYNQDELP
EKERISIPVLTDEELEHLQGVYSNVIEKIRENGGDGGNGDNSDPEFDWEYELTPIYNNKI
DERYITNLIQNVVSDTNESELFLNEKDVEEIDETIDNLEKINKPKADIIRSLWDKVKQNP
QEYAGTSISQLVEDLINKENHRLMQEFADKYKVDYNDLRYVINNYVSDGDSTRQKGMAEM
IDKEAYKKFKDAYPDTELKTLLKWKHKIRQEVDTFYTDKIRPLMYTE
NT seq 3024 nt   +upstreamnt  +downstreamnt
ttggatttggaaagagatattgaagaaaaattgatcaaccgcttaactcaaggtgttagt
cagtggacaagaagagatgatataaaaactgttagtcaattatgggataacttttttaag
atactttctaaaaataataaagctcagttacatgatcaaccattaactgaaaatgaaaaa
aatacaattcgtacacaaattacaaaacctaatttttatcaagcagctaagtttatggta
ggggcaaatcgtcaagttaagttccatttaaagcgtgaagattcgactttacctgatgct
gacttgactattttagataatacaaatatagctggtggaacttctgtttacgaagttgtt
catcagattcaattagcaagaaagtttgaattagatcaagatcgacgttcagatgtaact
ttactaattaatggtttgccaatgatacatattgaattaaagaaacctagtgaatcaatt
attaaggcttttaatcaaattcaaaaatatattaatgaagcaaaatttacagatattttt
tgcttcataaaaatgtttgttgtaagtaataagacaattacacgatacatttctgcaggg
caaagtttgcgtgaaaaatttttaactgcttgggtagatgataagaatcagcgtgttgat
aattatctagattttgctagagaagtcttgtctataccacaagcacaccatatgttagct
gattacacagtgttagataatcaagccaaaaatattattctattacgtccttatcagatt
catgctatcaaagctatttttaaggcttcacgtgaacaaaaatctggctatatttggcat
acaacaggttcaggtaagactttgacttcatataaggtagctagaaatttactgcaaata
ccttctatacaaaaaacggtatttttgattgaccgtcaagacttggatgtacagacagta
agtgcatttgaagcttatgcttataatgacacgattaatgttgatgatactgacaatagc
tatgatttggctaaccaattaattgataatgagaaaaaagttattgttacaactagacaa
aagttacaagcaattttcagaagaattgatgaacaaaaagataacttatcaaagaaatat
ttaaaactgaaagatgtaaaactagcttttgtagtagatgaatgtcatcgtgcagttaca
ccgtcacaaaagagagaattggataagttctttaataaatcacctttgtggtatggattt
acaggaactccaattatggataaaaatgcacgtgccgaaaatggtaatgatgctagaact
acaaaaggactctatggagatctattgcacacttatacgattaaaaatgcgatagctgat
aatgcggtattaggattccaaattactaatattggtcaagaaaacgttgaagatgaagaa
aatactgaaaaatgggacaagctttaccttaaggatgtacatatgaaggctgttgttaag
aagattttaaatttagcttatgttaagcaagggctaaaagatggtaatcgatacgctgct
atttttacaacttcatcaattaaacaagcccaaaaatattatcacatatttagagacatc
gctaatggcgaaggtgagataaaagttcctaaggtaattaaagaaaaagcagtagatttt
ccaagagtagcgataacttattcaatttcgcaaaatgaaaaagattcagaagataaccaa
aaagatatgaaagtttcgctcaaagattataatgcaatgtttgggactaactttgagatg
gggcaaattgatgcttataaccgaaatgttaacgatagacttgcacgaaagtctaagcag
tatcaagctccaagccagcaattagatattgttattgtagttgatagacttttgacaggt
tttgattcaccaacgttatcaacgttatatattgatagacgaccaatgaatccacaaaat
atgattcaagctttttcacgtactaatcgaatttacgataatactaagcaatggggacag
attgttactttccaatacccagaaacttataagaagaaaattgatgaagctattcaactt
tattcaaacggagctgccacatctgatataactgcgccagtttggacagaatctcggaag
aaatatattgcagcacgaaatggaataaatcaatatttactagacaaaaaagcattagac
agaatagttgatgcaccaatggaagaaatgaaagcttttgctaaagatttccaaaaattc
gacaaggcatttgtggcaattcaaacttatgatgaatattacaatcaagatgaattacca
gaaaaagaaagaatatctataccagtattaactgatgaagaattagagcatctacagggt
gtttattctaatgttattgaaaagataagagaaaatggtggcgatggtggtaacggagat
aactccgatccagaatttgattgggaatatgaattgacccctatctacaacaataagata
gatgaacgctatattactaatctaattcaaaatgtggtatctgatactaacgaaagtgaa
ctattccttaatgaaaaagatgtcgaagaaatcgatgaaactatcgataatttagaaaag
ataaacaaaccaaaagcagatataatcagaagtttatgggacaaagttaagcaaaatccg
caagaatatgccggaacttcgattagtcaattagtagaagatttaattaacaaggagaac
catcgtttgatgcaagaatttgcggataaatacaaggtagattataacgatttacgttat
gtaattaacaactatgtttctgatggggacagtactcgtcaaaaggggatggcagaaatg
attgataaggaagcttataagaaatttaaagatgcctatccagatacagaattaaaaaca
ttgttgaaatggaagcataaaatacgtcaagaagtagatactttctacacagacaaaata
agaccactaatgtatacagaataa

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