Ligilactobacillus salivarius JCM1046: LSJ_1017c
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Entry
LSJ_1017c CDS
T03340
Symbol
cydD
Name
(GenBank) Transport ATP-binding protein
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LSJ_1017c (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsj02000
]
LSJ_1017c (cydD)
Transporters [BR:
lsj02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LSJ_1017c (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_16
ATP_bind_1
DO-GTPase2
AAA_18
MobB
AAA_29
NB-ARC
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AIR10691
UniProt:
A0A089QI83
LinkDB
All DBs
Position
complement(1016624..1018348)
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AA seq
574 aa
AA seq
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MFDKGLLTLTDIKKTMRGLVGLYILQAFLIVGQAVSLGLVITHLWNGKPLKEQFIYIIGF
IISFAGREGLQWWSNRWLDDYARVEAKKLRKTLLEKVFILGPELVQKQGTGHMVTLTLDG
ISEVEDYIQLTLSKMISMMIVPIVVLAMAFYLDWVSGVILFFIYPLIVLFMIILGYAAKA
KADKQFVSFQRLSNHFIDSLRGIDTLKYFGLSKRYANSIYKTSERFRKTTMSVLRVAILS
TFALDFFTTLSIAVVAVFLGLRLINGEITLFPALTVLILSPEYFLPIRAFANDYHATLNG
KNSFHSIQEIINSAEVKESKLELHQWQPTDSLKLDNIEFAYDDNAEPVKFNTEFTGYQKV
GIIGMSGAGKTTLINLLSGFLPLKNGKFEIQGKETTDLNEDAWRNQIIYIPQSPYIFDNT
LRYNIAFYTPDTSDEEIIEAIKAVGLEDLLEELPDKLDTLIGNGQRTLSGGQAQRIALAR
AFLDKQRKVLIFDEPTAHLDIETELELKERMLPLMKDRLVIFATHRLHWMKDMDKIVVLK
DGKIAEEGQYDELLAHQAYFYELLNRAKGGEKNV
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataagggtttattaaccctgacagacattaaaaaaaccatgagagggcttgta
ggactttatatcctacaagcttttcttatagttggtcaagctgtcagtctagggttagtg
attacacatttatggaatggaaaaccacttaaggaacaatttatttatattattggtttt
ataatttcttttgctggaagagaagggctacaatggtggagcaatcgctggttagacgat
tatgcacgtgtagaagcaaagaaattacgtaaaactttattagaaaaagtcttcatttta
ggtccagaattggtacagaaacaaggaactggacacatggtcactttgactttagatggt
atttctgaagttgaagattatattcaactaacacttagcaaaatgattagtatgatgatt
gtgccaattgtagttttagcgatggccttttatctggattgggtatcaggagtaatctta
ttcttcatctatcctttaattgtattatttatgattattttaggatatgcagctaaggct
aaggcagataaacaatttgtttcttttcaacgtttatccaatcactttattgattcttta
cgaggaattgatacattaaaatactttggtttaagtaaacgatacgccaacagtatttat
aagacaagtgaacgctttagaaagactacaatgagtgtattacgcgttgcaattctttca
acatttgcgttagacttttttacaactttatcaatcgcggtagtagctgtatttttggga
ttacgtttgatcaatggtgaaattacattatttccagctttaacagtattgattttatcg
ccggaatactttttaccaattagagcattcgctaatgattatcatgcaactttaaatggg
aaaaattccttccactcaattcaagaaattatcaatagtgctgaagttaaagaaagtaag
ttagagcttcatcaatggcaacctacagatagtttgaaactagataatattgagtttgct
tatgatgataatgcagagccagttaagtttaatacagagtttacaggctatcaaaaagtt
ggaattattggaatgagtggggctggtaagacaactctaattaatttgttaagcggcttt
ttacctttgaaaaatggaaaatttgaaattcaaggtaaagaaactactgatttaaatgaa
gatgcatggcgaaatcaaattatctatattccacaaagtccatatatctttgataatact
ttgcgttacaatattgctttctatacacctgatactagcgatgaagaaattattgaagca
attaaagcagtaggattggaagatttattagaagaacttccagataaacttgatacatta
attggtaatggtcaaagaactttaagtggtggacaagctcaacgaattgctttagctaga
gcatttttagataagcaaagaaaagtattgatttttgatgaaccaacagctcacttagat
attgagactgaattggaattaaaggaaagaatgttacctttaatgaaggatagattggta
atttttgctacacatcgtctacattggatgaaagatatggataaaatcgtcgtcttaaag
gatggaaaaattgctgaagaaggacaatatgatgaattgttagctcatcaagcatatttc
tatgaattattaaatcgagcaaaaggtggtgaaaagaatgtttaa
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