Ligilactobacillus salivarius JCM1046: LSJ_1142
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Entry
LSJ_1142 CDS
T03340
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj03030
DNA replication
lsj03430
Mismatch repair
lsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSJ_1142 (dnaQ)
03430 Mismatch repair
LSJ_1142 (dnaQ)
03440 Homologous recombination
LSJ_1142 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsj03032
]
LSJ_1142 (dnaQ)
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_1142 (dnaQ)
Enzymes [BR:
lsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSJ_1142 (dnaQ)
DNA replication proteins [BR:
lsj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LSJ_1142 (dnaQ)
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LSJ_1142 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AIR10815
UniProt:
A0A089QDI8
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All DBs
Position
1150231..1150764
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AA seq
177 aa
AA seq
DB search
MNFVAIDFETANPKRYSACSLALTVVKNNQIADQFYSLIKPDTDFSWRNIQVHGITEKQV
QNAPSFPELWPHIQNFFTPNNLIVAHNASFDSSVLLRTLEHYDITLPHYQLLDTLRTSKK
FFKDFENHKLDTICNNLNIDLKHHHNALFDSTACAEILLYQANLFGEDQLQPFIKIK
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttcgtagcaattgactttgaaacagccaatcctaaaagatatagtgcctgttct
ttagcactaactgttgttaaaaataatcaaattgccgatcaattttattctttaatcaag
cctgatactgatttttcttggagaaatattcaagtccatggaattacagaaaaacaagta
caaaatgcacctagttttcctgaactctggccacatattcaaaatttctttacacctaac
aatctaattgttgctcataatgcaagttttgattccagtgttttattaagaacactagaa
cattatgatatcaccctgccacattatcaactattagatacacttagaactagtaagaaa
tttttcaaagattttgagaatcacaagcttgatacaatttgtaataacttaaacatcgat
ttaaagcatcatcataatgctttatttgatagtactgcttgtgctgaaattttactttac
caagctaatctttttggtgaagatcagttacaaccattcattaaaataaaataa
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